LOCUS       WKY08309.1               666 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-5133
PROTEIN_ID  WKY08309.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007656"
                     /note="NIPPO_CHRIV.G11496.T2"
     intron_pos      89:0 (1/15)
     intron_pos      122:0 (2/15)
     intron_pos      168:0 (3/15)
     intron_pos      201:0 (4/15)
     intron_pos      247:0 (5/15)
     intron_pos      280:0 (6/15)
     intron_pos      326:0 (7/15)
     intron_pos      359:0 (8/15)
     intron_pos      405:0 (9/15)
     intron_pos      438:0 (10/15)
     intron_pos      484:0 (11/15)
     intron_pos      517:0 (12/15)
     intron_pos      566:0 (13/15)
     intron_pos      636:0 (14/15)
     intron_pos      661:2 (15/15)
BEGIN
        1 MQFLVLLALV GLSVQFPRQS SGYGDNNPQD VQYAAGRSPR NKNVDYTTGG EAPKPAHDAP
       61 ARYTGLQIPA NYGQNVIGNK IDAQTLGQLN NQGQTSVQKG GDQTNVGANN NQVNVGQQNN
      121 QGGNAGYKPA YDAPSYGANV PTYAAILVPN YGGNVVGNKI DTQNLGQVNN QGQSSVQKGG
      181 DQTNVGTNQN AVNVGQSNNQ GGNAGYKPAY DAPSYGANVP TYAAILIPNY GQNVVGNKID
      241 AQTLGQANNQ GQSSVQKGGD QTNVGANSNA VNVGQTNNQG GNAGYKPAYD APSYGANVPT
      301 YAAILIPNYG QNVVGNKIDA QTLGQANNQG QSSVQKGGDQ TNVGANQNAV NVGQANNQGG
      361 NAGYKPAYDA PSYGANVPTY AAILIPNYGQ NVVGNKIDAQ TLGQANNQGQ SSVQKGGDQT
      421 NVGANANTVN VGQANNQGGN AGYKPAYDAP SYGANVPTYA AILIPNYGQN VVGNKIDAQT
      481 LGQANNQGQS SVQKGGDQTN VGANANAVNV GQANNQRHQG GNVGSKPAYD APSYGANIPT
      541 YAAILIPNYG GNVVGNKIDT QNLGQTNNQG QSSVQKGGDQ TNVGANSNQV NVGQANNQGK
      601 GVGPAYDAPR YYAGNKVGSQ NLGQGSTQGQ GNYQQGGAQG NYGYNQNTVN VSQTNNQSVN
      661 IKKKTA
//