LOCUS       WKY08226.1               608 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-5051
PROTEIN_ID  WKY08226.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007600"
                     /note="NIPPO_CHRIV.G11440.T1"
     intron_pos      40:0 (1/15)
     intron_pos      71:0 (2/15)
     intron_pos      110:0 (3/15)
     intron_pos      135:0 (4/15)
     intron_pos      171:1 (5/15)
     intron_pos      188:1 (6/15)
     intron_pos      241:0 (7/15)
     intron_pos      285:0 (8/15)
     intron_pos      333:0 (9/15)
     intron_pos      364:0 (10/15)
     intron_pos      403:0 (11/15)
     intron_pos      428:0 (12/15)
     intron_pos      464:1 (13/15)
     intron_pos      481:1 (14/15)
     intron_pos      534:0 (15/15)
BEGIN
        1 MSDKSDPKPS SSNFFEWFAI VILILIRLIS LSMVLIWPPN TIVDFPLRVR SCVHAKTQVM
       61 IRKMVGQPFR LWRRFGQIMD ACSYDPYLDV HDFHSSSGLA LYHVPSRNQF SNNTLCRIVS
      121 INDALHMDAE EKLTIATGCE FYASDPNIDQ PSTFHTRFAS YRVLLEPWSS PALKNDTGGL
      181 PAYTHWKGRS ETIDLQTLLS KKFGVHNMEN LIIGPFRYNA EFRDFFHSGI FHRLGSRLCQ
      241 VNIIYQQPDM ISATQFVRAF WHILYRSSFL VHKASKSADD RYMNVKSEED PALTMRDNCA
      301 PNSSASVFVW TTIVLLVLIR LLSLLIYFIW APDGLADYPL KVRACLHDKT QVMTYRRKGD
      361 PFRLWKRLSQ IANGCAYNQE LIVKEFSSSS GLSLYHVSRR KRLYSDRRCK IVSINDALHM
      421 DAEEKLALST GCKFYASDLN ITEPSGFHTK FASYRVLSEP KIRKAPKNDT GEIQSYTLWS
      481 GQSRTIDLRS LLTAKFGVHN LENLIVGPFH YNIEFRDFLD PTAYNIFGSR LCQVNIIYEH
      541 PDIVSAAQFV RSFRQILYRS SFLILRTSRS ADDRYMNIFA LNYVDRHCAV RHFANSHGFL
      601 AKVLPDNE
//