LOCUS       WKY08154.1              1343 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4979
PROTEIN_ID  WKY08154.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007557"
                     /note="NIPPO_CHRIV.G11397.T2"
     intron_pos      21:0 (1/32)
     intron_pos      77:0 (2/32)
     intron_pos      123:2 (3/32)
     intron_pos      175:2 (4/32)
     intron_pos      202:0 (5/32)
     intron_pos      226:0 (6/32)
     intron_pos      273:2 (7/32)
     intron_pos      301:0 (8/32)
     intron_pos      328:0 (9/32)
     intron_pos      379:2 (10/32)
     intron_pos      414:0 (11/32)
     intron_pos      453:2 (12/32)
     intron_pos      491:0 (13/32)
     intron_pos      560:0 (14/32)
     intron_pos      597:1 (15/32)
     intron_pos      632:0 (16/32)
     intron_pos      673:0 (17/32)
     intron_pos      704:0 (18/32)
     intron_pos      766:2 (19/32)
     intron_pos      800:2 (20/32)
     intron_pos      822:0 (21/32)
     intron_pos      863:1 (22/32)
     intron_pos      899:0 (23/32)
     intron_pos      951:1 (24/32)
     intron_pos      998:2 (25/32)
     intron_pos      1050:2 (26/32)
     intron_pos      1098:0 (27/32)
     intron_pos      1151:0 (28/32)
     intron_pos      1185:0 (29/32)
     intron_pos      1228:0 (30/32)
     intron_pos      1263:0 (31/32)
     intron_pos      1303:1 (32/32)
BEGIN
        1 MLGASSSEDD DDDFVNEEPE LTYSLKKRSV LGQLSPRSAS PAPSDSVSQT NSLKRNNSSS
       61 TYRRKDSCHS QTPARSARTI STVSRPMLQS SQDISDNDYE DDAPTQLVND EPTLSKEEQE
      121 RIRAEKEEEE HKKNLQMYVF VARCIAYHFN AKQPTDMARR QVKVTKHDLS RMKERFQAFL
      181 KGETNIATDE AFAKAMHSYC EVFLKSERVQ KVVSAGGFSM HDFREVFRCN VEKRIRSLPD
      241 IEGLSKDTVL NSWMTKFDTI TKGDDEAQGR TVRGRSRNAP SQPNADVILG KEQLYDMFQQ
      301 LDNPDEQAAA IRREVATRED ACKEIHKMRK IMPKFVVKDM ETLFMDEVRQ SINLLISNLE
      361 SVPVTPRGQA VGKRKDKSRL KRRTSSGSLN KNDSDDGEVT LTKSDVVLTF NMEVVVMEVQ
      421 GLKALAPNRI VYCTMEVDGH KLQTDHAEAQ RPSWDTQGDF STKNPLPVVK VKLYSEVKSI
      481 VSFEDKELGK VIIQPTPNCS RSPEWYAMTV PKNAADQHLK IRIAIRVEKP PNLKYCGYCY
      541 CMGRQAWKKW KRRFFCLVQV SQYAFAVCSF RQKKSDPTEF VQLDGFTIDY MPEPDQELVA
      601 QGGKHFFTAI KEGDELKFAT DDENERHLWV QALYRATGQA YKPVPPKQST VAPKAQGFQD
      661 KASKHGMDEI ILADPISFNH DHLFADIQRQ ALNFRMNEPI CSLGWFSPGQ VFVLDEYCAR
      721 YMVRGCYRHV TLLSNLLDKA DQGQLIDPTL IHYSFAFCAS HVHGNRPDGV GTVTLEEKET
      781 FQEIKERLRV LLEKQITNFR YCFPFGRPEG ALKGTLSLLE RVLMKDVVSP VPPEEVRAVI
      841 RKCLEDAALV NYTRICNEAK IEQRMGVDVS PQQRIEDMMR VTEYCIDLLK ENEEHHGEAF
      901 AWFSDLLADH SEIFWSLYSV DLDSAMEVQP CDSWDAFPLF QTLNDFLLSE KSLNGGIFHK
      961 KLTTQFQPLV VRYTDLMEHS ISQSIDKGFS KEKWEPRKEG CATSEDIYWK LDALHTFVAD
     1021 LNWPEEEFRK YLNVRMKSLT SDMISKVASS TYQQFDSWMQ RARKSTDYIL PSEVCVMINV
     1081 LFSSKTRATR VTVDAGEFKY QSKLDETLDT MLLDMETCIQ DRLIGVLEFV LGKLARYDEG
     1141 NPIGALLSMA PKPTSIFNKM KTMVGEQGIN ISGTPTGTPT TPQNKTPVSQ QQSTGHMGNS
     1201 YVTFMRGCTE QLRQIVTDEV WVNTLFENWY ANQVKMINEW LTERLQQSLS SYQFTCLSFI
     1261 VKKVYSDFEL QGIDDEKLNS KIYQSINRRL QLEEANVALH DHSNGHAPSV FPSVSSLGNA
     1321 TAAVSNVSSM VEGAGARVFS FFK
//