LOCUS       WKY08112.1              1359 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4937
PROTEIN_ID  WKY08112.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007533"
                     /note="NIPPO_CHRIV.G11373.T2"
     intron_pos      44:0 (1/33)
     intron_pos      78:2 (2/33)
     intron_pos      116:2 (3/33)
     intron_pos      172:2 (4/33)
     intron_pos      217:0 (5/33)
     intron_pos      248:0 (6/33)
     intron_pos      289:2 (7/33)
     intron_pos      319:0 (8/33)
     intron_pos      357:0 (9/33)
     intron_pos      406:0 (10/33)
     intron_pos      465:0 (11/33)
     intron_pos      489:1 (12/33)
     intron_pos      519:1 (13/33)
     intron_pos      568:0 (14/33)
     intron_pos      587:0 (15/33)
     intron_pos      630:1 (16/33)
     intron_pos      668:0 (17/33)
     intron_pos      700:0 (18/33)
     intron_pos      723:2 (19/33)
     intron_pos      753:2 (20/33)
     intron_pos      780:0 (21/33)
     intron_pos      830:0 (22/33)
     intron_pos      873:2 (23/33)
     intron_pos      908:2 (24/33)
     intron_pos      970:2 (25/33)
     intron_pos      1006:0 (26/33)
     intron_pos      1049:0 (27/33)
     intron_pos      1080:0 (28/33)
     intron_pos      1131:2 (29/33)
     intron_pos      1179:0 (30/33)
     intron_pos      1212:0 (31/33)
     intron_pos      1246:2 (32/33)
     intron_pos      1313:0 (33/33)
BEGIN
        1 MGEKADRTLT LLHLRKTFSE YMRIPLSGSK DVDPNRLLPL FTKVMAMFTP AELKAEFKEI
       61 LNFTTFLCSV LVREVRQRAS SHGTVEAAAS IAEYLQPSSS QKGWLLLNSI YFLISTDDEV
      121 IINSVCKVSL PSTLVKTIYL FFDLPANEEL AEARAKLNDL LTCLLDRLCS FKYVCEELAK
      181 KDDLLLLFIG SSSSVPPENV QWRKTTARVL EALSAKSLTP TAIKYISTKD CIRTYLTNLK
      241 SPKLQPQETA EMIICLLCVL KDSSRQTNQL IECFSQCNGY LVIKDFLLRN EDNEEIVRNI
      301 MLMLISVITN GPHEIKPQHS SGLVQLPTFN LPAPAGNGLS VRNTQAFGLI HKVFLESQSS
      361 AVCATSVDIV HSIYTCDSAN YFILDKEYPL ALFIEQMDRK DDIVRSKILE LVEHCVFHLN
      421 YIPCKELIGI CVQMKTELAS GQQSICIAAV QAAFRLLTVD SVIKDAFREV GLLDTLCYII
      481 NNLFAQYKQR VLTEDEKKLT LLATDLLTVI IKGNLENARM FSDCFGARTL LSVLTVVTGE
      541 WRSSSLQLLK QLLLLASTDQ YIAGVIQVIS QVGPQQQLEF NVDLLKTVLG VLRESHKVRV
      601 QFRKTGGYLG LISMLLGLEG AFSRMDESQG TVPAEAVELL DFIHLIFKVL TISMRFEPSN
      661 AKYFAVEVSW DSITTVLRLT GAFCENTVVD VVQPEWRLQG SELKDELAAC HAVFKMDEDI
      721 QSGSIPAGMP PSIFFANYII RLLFNMALDN YEKMSSDVTW SASDGSLEEC IVSWTSSVLV
      781 HPGAVQSILS LLPSIHSDNM KWLVGAQYYS GLLLKALLKP ERNQQLMCQV DMPRHLLSIA
      841 SKLFLCENHI LLHPFYYVLE RLSYQSMQPC QLRHFLRLDL PLCCRNLDEG ENDEPSRPNE
      901 GGPVPLQRVK ALVSMMTPRD QRLSHAPSFV ETDLAMEGFG CLFIPSLAPL FSSNRTERVF
      961 PPLNGISLST WLYIDAFSDK KLDAHPLRLL TIMRTVTWQD DRRKQGPCHL ACLTIQFSPI
     1021 DRSLLISTDE HENPGGDLEK EAKIPSEKAI RVTLADIVRP MEWTHICVVL SRSVLKPSQA
     1081 TVYINGRAVS TQRLQYIVLT AGGAATQLAH THVVNAVIGT LPAMRRPSRL RYRLASTFLI
     1141 EEPLSPEVVR NIYDLQPHYV GSLQAIGPDR TSLVQEEKIV FALNGMATSE MTLAKIRTVH
     1201 NKLDAEILAP HLGISSSDNS TPLRILLNTA AHAPGAGRAF GAVIIGYLGM RTFIPRPVPR
     1261 LLDSMGGFAC LYGLVAMATD SEGLYASLKA VVSAVRSNSN LQATLHANRA YQTLAVLLED
     1321 KANLLNSHIM HMIFSMAGTL DTAREVATIP NAQVGNFRL
//