LOCUS WKY08097.1 374 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4920
PROTEIN_ID WKY08097.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007525"
/note="NIPPO_CHRIV.G11365.T5"
intron_pos 11:1 (1/10)
intron_pos 43:2 (2/10)
intron_pos 95:1 (3/10)
intron_pos 113:2 (4/10)
intron_pos 135:2 (5/10)
intron_pos 160:0 (6/10)
intron_pos 222:1 (7/10)
intron_pos 254:0 (8/10)
intron_pos 295:0 (9/10)
intron_pos 323:0 (10/10)
BEGIN
1 MGNFSTRTDV CEKRRRQGMV VGPIMNASTK FSDNYDVKEE LGKGAFSVVR RCVHKATAAE
61 YAAKIINTKK LSARDFQKLE REARICRKLQ HPNIVRLHDS IQEESFHYLV FDLVTGGELF
121 EDIVAREFYS EADASHCIQQ ILESIAYCHQ NCIVHRDLKP ENLLLASKAK GAAVKLADFG
181 LAIEVGQDTE AWFGFAGTPG YLSPEVLKKD PYGKPVDIWA CGVILYILLV GYPPFWDEDQ
241 HRLYAQIKAG AYDYPSPEWD TVTPEAKSLI DSMLTVNPKK RITADQALKV PWICNRERVA
301 SVMHRQDTVD CLKKFNARRK LKNLIGVRSH IRLHLVPDQR IGHLRNLLAS YANPALLILG
361 KEAEGARMSR FRSH
//