LOCUS       WKY08068.1               718 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4893
PROTEIN_ID  WKY08068.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007513"
                     /note="NIPPO_CHRIV.G11353.T1"
     intron_pos      5:1 (1/16)
     intron_pos      43:1 (2/16)
     intron_pos      81:1 (3/16)
     intron_pos      132:1 (4/16)
     intron_pos      176:0 (5/16)
     intron_pos      202:0 (6/16)
     intron_pos      273:2 (7/16)
     intron_pos      322:1 (8/16)
     intron_pos      368:2 (9/16)
     intron_pos      398:2 (10/16)
     intron_pos      443:2 (11/16)
     intron_pos      505:2 (12/16)
     intron_pos      580:2 (13/16)
     intron_pos      612:0 (14/16)
     intron_pos      657:1 (15/16)
     intron_pos      695:2 (16/16)
BEGIN
        1 MPSHGMRSII PLTVLVYSLA SITNGAKFDE QVKEMYTNPL SHGFGEDIDW VPWEDAIEKA
       61 LDTNKPIFLL IHKTWCHACK ALKKTFQQSN ARKAFKTLSQ YFVMVNTEDD EEPFEEEYRP
      121 DGKYIPRLLF LDKNGDLLEQ FKNKKAEYKK YSYYYSSPAD IINSMKDVLR FYEIEVPELK
      181 RGDKLKVPAS KAKELEKEKE KTAKKEAEKK EKKEKKEEEK KKKEQEKEEK KKEEKKKEEK
      241 KKEEEKKDDK KKADKKKDDK KKDEKKKDKK QELPFKHTLK RYLALSGLHS FFMILAGYFF
      301 IFHQLFLTSH SASTPMHLYL KELCPPGLMP LTGAQHVRTC EDRCPRGSSC IRKICCTRPP
      361 QCNHFTYKRM FSNLFSASHP VISSGLQNIR LCSECENGVC APFHSSSVSI CCQSSTAFCG
      421 PGSEVEMDGM LARDCSKMPC SAGYECSLAP YGDRVCCSLA QCSSGKRARA ICAAGCRQDE
      481 VCEVIHAQRW CCPMSQRRCP RNRLSNGAVC SSTDSYCDDG YECVESNDRT GYLCCKIVEK
      541 RVTPIPRAKM FSLSTSLPTY PTTTEFTPIE VTFAPAPVIS SITPQCFDDN VPLMVDGEFM
      601 ACPQINAPCP KAGFTCQAVV GGLYCCPMDA EEEEEYPEST ESPTILMTSS TPKDCTGCEP
      661 TTTERPTPRC PYAFREARRA TTDEIKTCIG FLDFSCPFGY SCLPSSTTKS FLCCAMVT
//