LOCUS       WKY07999.1              1374 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4824
PROTEIN_ID  WKY07999.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007470"
                     /note="NIPPO_CHRIV.G11310.T2"
     intron_pos      7:2 (1/33)
     intron_pos      62:0 (2/33)
     intron_pos      107:0 (3/33)
     intron_pos      158:1 (4/33)
     intron_pos      167:2 (5/33)
     intron_pos      243:0 (6/33)
     intron_pos      264:1 (7/33)
     intron_pos      334:0 (8/33)
     intron_pos      380:1 (9/33)
     intron_pos      420:0 (10/33)
     intron_pos      454:1 (11/33)
     intron_pos      476:0 (12/33)
     intron_pos      533:0 (13/33)
     intron_pos      576:2 (14/33)
     intron_pos      630:1 (15/33)
     intron_pos      653:0 (16/33)
     intron_pos      694:2 (17/33)
     intron_pos      733:1 (18/33)
     intron_pos      767:0 (19/33)
     intron_pos      802:2 (20/33)
     intron_pos      837:0 (21/33)
     intron_pos      870:0 (22/33)
     intron_pos      895:0 (23/33)
     intron_pos      933:0 (24/33)
     intron_pos      962:0 (25/33)
     intron_pos      1010:2 (26/33)
     intron_pos      1041:0 (27/33)
     intron_pos      1089:0 (28/33)
     intron_pos      1144:2 (29/33)
     intron_pos      1183:0 (30/33)
     intron_pos      1248:2 (31/33)
     intron_pos      1308:0 (32/33)
     intron_pos      1351:1 (33/33)
BEGIN
        1 MDSAVLRYLQ PAKPGQDDSQ LFENRIWIPD AEVGYRLASV LDDGLTDVLV GFRDEQGFFE
       61 KKRVARADCE ATTLNSLAAD LCHLTEPNAA TVLDSLTRRY QQGVIHTYCG LFCVVLNPWR
      121 PLPIYTTDLM ANYRTGVGDS YPHVYMVAQS AYDGVLRGGR NQSILITGES GAGKTENTKK
      181 IIEYILDCCG STSGRTRQNG NEICNGYSMS SSHVGSDVIS SGVLLEAFGN ARTTHNNNSS
      241 RFGKFIRIEF DQQGKLQSAQ IECYLLEKSR VVNQDVGNRN FHVFYQLLSN AFPKELRERL
      301 FLTRSADHYK FLNQGRVCTN KDIDDAACGL QTDQALDRLG ITEEEKLEVY SILAACLLTG
      361 EIKFGERSGL DMSYVDGQAE VDAVSSLLGI NSHRLVEALT QPSIRVGDKV IRKNQNMQKS
      421 VYSAAALAKV LYDRLFKWLL EKCNRKIGAN TNMMSESVLN SFIGVLDIAG FEIVQKNSFE
      481 QLCINYTNEK LQAFFNHFMF VREQSEYLEE GIRWTQADFA LDLQPTIDLI EKPLGLLSLL
      541 EEECVVPNGS DQSLLQKLCT SLEKYPQFRK AKQSQRCTIV RHFTIKHYAG SVDYNIDSWV
      601 EKNRDVVENA VLEVMGEATK PLTKSLFPPV STDVTRSRRG TLCQSTVTFL YKNQLGSLLE
      661 TLSSSSAHFI RCVVPNYDRV PNKIDGPLVL NQLRCNGVLE GIRICREGYP SRLPFSEFVQ
      721 RYRVFAKEAP HTGHGAVDIC RAVGIDDSRY QIGQTKIFCK IGVISELEAR KRDYIHAAIT
      781 GLQARIRWNN AQKDCEMRRK RLAAIFTIQD NVRTFAELAV WPWYRIFGLV RPLIPKSREK
      841 ERIKELEEEN ECLREENEKL RRECLIISAS CDVLRVKAEE AEQAAEEARR ITVKEVAEKE
      901 REIQKVRIEM QQNEDVFDML EKKYNEQHNK VMKMNESLRE YERKLDQIGM EKEELERDIK
      961 KLQATVEKEQ QLREAKESQC ERNEALIAEL QGRLAKYADD ADHANDKLAR AEADLEMEKM
     1021 RTQKQIEMVA ELQRAIADLN GRLANFDSVL QDEKNMRRKV ERDCERMKDD RTHAETSLAK
     1081 LQQKYDILKE ECRRKDQEIS RLEKKLEDKE VVMADCVKDL KDQQRTRVME LEEKIADMKR
     1141 KLLKRRDSQY DLSNCGLQRA PSTSNIIEKD RKISELERQL SQEKESLLRQ NHNANATLED
     1201 LRRQLCAAES AADSLSERLR RAQADGESWK RKHEEALNEA KNDILHERKR AAEKIAACQH
     1261 ENNLRIARRG TDDSERDRLR EELNRTQAEL DRAVTTIRQL ESNVQSQETL GGTLEAQYRN
     1321 ALMELETARD ENCALKAKIR RQYKQIELLT QQDETNSAMN TFQNKLEKLD QKEH
//