LOCUS       WKY07780.1               782 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4605
PROTEIN_ID  WKY07780.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007334"
                     /note="NIPPO_CHRIV.G11174.T1"
     intron_pos      15:0 (1/14)
     intron_pos      74:0 (2/14)
     intron_pos      105:0 (3/14)
     intron_pos      159:2 (4/14)
     intron_pos      226:0 (5/14)
     intron_pos      285:0 (6/14)
     intron_pos      353:1 (7/14)
     intron_pos      391:0 (8/14)
     intron_pos      450:0 (9/14)
     intron_pos      519:0 (10/14)
     intron_pos      573:2 (11/14)
     intron_pos      640:0 (12/14)
     intron_pos      699:0 (13/14)
     intron_pos      763:1 (14/14)
BEGIN
        1 MDISNTAFAA FSLNMSLSTG QIALFIELVV FVSIVSLVVL FCTLSIAAFL RKSTLSQTSL
       61 AHYRRIFFLL LAQIACPAIF IFVPFMAAIV AIVARMDTSP LFADKVGFLN SYFIVYSTPA
      121 FGLPVIASWI ATVSLVVLLS TTAVLVVNSF IYRYIQMCRS RWFDLFPIET ATLFALLSFA
      181 LIVNICAFVY VTYTFGSDVD KWVLEVLRRD DMDINNTAFG AFSLNMTLST GQIVLFIEFA
      241 LFIQMVSLAV LFCTLSIAAF LRNSTLSATS LAHYRRMFFL LLAQIACPAI FIFVPLAAAF
      301 VVIVARIDTS PLFSDAVDLL ISLHPLVNSL IVILFLDDYR RFLLVKLSCK AIVVYGVCTF
      361 GSDVDQSVLD VLRRDDMDIT NTAFAAFSLN RTMSFGQMIL FIEFVLFVST VSLAVVFCSL
      421 SIAAFLRNST LSETSLAHYR RMFFLLLAQI METLRRSEMN FSSIIVQTIC LLSLLSNFTL
      481 LILVFACPVK RVGSYKYFFL LSAVNDMAFS VAHGISQPKV ISVNSYFVVY STPIHGLPLV
      541 VNWIGVLSLI VLLSTTGAVV VNSFMYRYIQ LYRSACFDLF PIWMATMFTF ITFATTANGC
      601 VFAFVVFSFG NDVDQSIREL LHDAGLEINN TAIGGFSLQK TLNAGQMALL IQFVSCTLIW
      661 ALGVLFCALR IAALLRKSTL SKTSLVHHRR MFFLLLAQTA CPGLFICLPM VTAAGIIFAG
      721 IETSALYADM LDMFLSFHPL GNPIIVILFL DDYRSFILTL LIYLMENSSF ENPGEIYVAR
      781 IH
//