LOCUS WKY07762.1 264 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4587
PROTEIN_ID WKY07762.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007324"
/note="NIPPO_CHRIV.G11164.T2"
intron_pos 15:0 (1/8)
intron_pos 42:0 (2/8)
intron_pos 81:0 (3/8)
intron_pos 104:0 (4/8)
intron_pos 131:0 (5/8)
intron_pos 164:0 (6/8)
intron_pos 204:0 (7/8)
intron_pos 245:2 (8/8)
BEGIN
1 MPTSLAQRID GFEEELFDDY SVYETATQCY RKYWNILNVE NFFDMFPHIA GRCAPLFSEM
61 NIYRFGDEDE WRYSMLPRAI KGERKCNAFA FIGLTHALAV ETEIKRNLMF DCDFLGMNPN
121 ASDIAHDFAM EVGEFMRSRD LEAWNGLSER SLASHLSKVM ELKASEKAVV AEHIFVNEIE
181 DPYALLPKMI DTVGYVKYIV PCQLTIDLPL PTHFQLINLI DFVGNIIEKE RYTILSAEKI
241 DDTMRLYLFY HAHQKCNQRY GPDY
//