LOCUS WKY07757.1 312 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4583
PROTEIN_ID WKY07757.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007321"
/note="NIPPO_CHRIV.G11161.T2"
intron_pos 48:0 (1/7)
intron_pos 81:1 (2/7)
intron_pos 110:2 (3/7)
intron_pos 168:0 (4/7)
intron_pos 185:0 (5/7)
intron_pos 233:1 (6/7)
intron_pos 291:2 (7/7)
BEGIN
1 MDEAIGKALN DDVKPFGRGG GGCINTGQGY ETKSHGKIFV KVNIKKGSDV MFRGEAASLK
61 AIHETNTVRV PKPIDVVDLG AHGWGLVTDY IEMGGGTRRD LVELGTQLAR MHKYNEDRLR
121 DSSRSGSFVG SSESGDSYKD GVKRFGFHTV TCCGFLQQNN DWCDDWATFF IRNRLKMQVD
181 LLIEKGNRDI LSVWPELERK ATSLLATCSD VVPALVHGDL WGGNWSSSSE GPVIFDPASA
241 FCDPEFEQGI MDMFGGYGKD FWTAYHQVLP ARPDRKKRVL LYELYHSLNH WNHFGSSYRG
301 SSMTMISQIM SS
//