LOCUS WKY07700.1 307 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4524
PROTEIN_ID WKY07700.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007291"
/note="NIPPO_CHRIV.G11131.T1"
intron_pos 28:1 (1/7)
intron_pos 41:0 (2/7)
intron_pos 95:2 (3/7)
intron_pos 145:0 (4/7)
intron_pos 203:0 (5/7)
intron_pos 238:2 (6/7)
intron_pos 268:0 (7/7)
BEGIN
1 MIGCCITRKH NFVALRATLV HNTTVVRGAI RCHFQRGPRR RSLCMDDREA QRDELEILES
61 IYGDLISFES EDKIRISFDN DVRLSVKLPQ NYPSQEPPQY ELSGPSLSRA DRTALENELN
121 NAYLENLGAP IIYIWITVIK NFLEASFSVE EEEAVNNSGE SYILEGSSLK VDDVPTIYHG
181 DVFTDRKSHF QAHLARVHSK EEVALVLDRL LENGKIARAT HNMYAYRITE LRDGREIRLH
241 DCFDDGETGA SSKMLELLHK MDADNVLVVV SRWYGGIHLG PDRFRHINNL TREIISKHGL
301 DSRTSTK
//