LOCUS WKY07696.1 317 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4521
PROTEIN_ID WKY07696.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007288"
/note="NIPPO_CHRIV.G11128.T2"
intron_pos 18:1 (1/8)
intron_pos 59:1 (2/8)
intron_pos 108:0 (3/8)
intron_pos 134:2 (4/8)
intron_pos 165:2 (5/8)
intron_pos 192:0 (6/8)
intron_pos 224:0 (7/8)
intron_pos 274:1 (8/8)
BEGIN
1 MALAGQIAIV TGASRGIGRG IALQLGEAGA TVYITGRKPE KSDAAAIDKL PKLEEVAKEI
61 SARGGRGIAA YVDHSNMQEV KEFFARVERD HNGQLDILVN NAYSAVHTIF ANADKAFYQC
121 PPEMWDEVNN VGLRNHYYCS VYAARMMANN RSGLIVNISS AGGLRYLFNV PYGVGKQALD
181 RMSADMAVEL KDKNVCVVSI WPGAVRTELV MNLIDAKGAA QNDRATMFRQ GETTEYPGKA
241 VVALASDDRR MEKTGRILIT ADLGSEYGFR DVDGRDPPNM RSLSFLLMHS GYKQTAELVP
301 LWLKVPGWFL WGASSRL
//