LOCUS       WKY07567.1              1272 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4392
PROTEIN_ID  WKY07567.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007212"
                     /note="NIPPO_CHRIV.G11052.T2"
     intron_pos      13:1 (1/33)
     intron_pos      25:2 (2/33)
     intron_pos      45:0 (3/33)
     intron_pos      58:0 (4/33)
     intron_pos      91:0 (5/33)
     intron_pos      106:1 (6/33)
     intron_pos      136:0 (7/33)
     intron_pos      180:2 (8/33)
     intron_pos      238:0 (9/33)
     intron_pos      279:2 (10/33)
     intron_pos      337:0 (11/33)
     intron_pos      375:0 (12/33)
     intron_pos      415:0 (13/33)
     intron_pos      454:0 (14/33)
     intron_pos      490:0 (15/33)
     intron_pos      522:0 (16/33)
     intron_pos      579:0 (17/33)
     intron_pos      609:0 (18/33)
     intron_pos      640:1 (19/33)
     intron_pos      665:0 (20/33)
     intron_pos      693:1 (21/33)
     intron_pos      745:0 (22/33)
     intron_pos      781:0 (23/33)
     intron_pos      835:0 (24/33)
     intron_pos      868:0 (25/33)
     intron_pos      903:0 (26/33)
     intron_pos      946:0 (27/33)
     intron_pos      969:2 (28/33)
     intron_pos      1052:0 (29/33)
     intron_pos      1087:0 (30/33)
     intron_pos      1156:0 (31/33)
     intron_pos      1205:0 (32/33)
     intron_pos      1247:1 (33/33)
BEGIN
        1 MARLARSSSS RRGWETERTP DFFNWATVKL PNHDSIPCLR CCFEHLRLPP VLLIAKRFRY
       61 TSACDKLLLL LGSCVAVGTG MGMPLMSIAS GRVTQGYMDL NGNSSTPKQF ETAVIQSCFH
      121 YLYLGCGVFL AGTIQTTCFI AVCENLVNRL RRKFFKAILH QDIAWFDTNN SGELATKLFD
      181 NLERFKEGTG DKIGLTIQYI AQSLGGFVIA FVFSWKLTLI MMSLTPFMIV CGSFMAKRAA
      241 LVTKEEAKKY AEAGKIAEEA LTSMKTVIAF NGQQYECERY DQALESAKAV GIKKSICTGM
      301 GLAFTSLLLF TSYCLGFWVG TDSVFNGEAQ GGTVVTVFFS VLLGSTAIGQ AGTHFSVIGT
      361 AAGATSALYE VIDKIPEIDS YSKEGERPHS LKGRVTVSDL KFAYSTRPDV QVLKGVSFEV
      421 NPGETVALVG SSGCGKSTII QLLLRYYNPN EGKILIDGKA IEKINIEFLR NFIGVVLQEP
      481 RLFNTTIEQN IRYGREDITE AEILAALRRA NAYDFVQALP SGIHTNVGDR GTQLSGGQKQ
      541 RIAIARALVR DPKILLLDEA TSALDADSEH VVQQALENAS KGRTTIVVAH RLSTIRNANR
      601 IIAMKDGVVV EIGTHCELMA RNGLYHELVS AQVFSDIDGE ATTPPKPGLA SQLSRSSAHS
      661 TDEKYSHPEA ISNAATPGIP KKAENDLDRL KKEVAEEGAA NANFSEIFRH ARPEWCLILM
      721 AVLSCTVQGC TRAVFSLVFT QMMEVFSKRA GDPELKTEGH FWALMFLVLG VINAIINFSQ
      781 SYAFGLSAER FTKRLRSLVF RNVMRMDASY FDMPRHSAGR ITTRLATDAP CVKSAIDHRL
      841 GAVLSSIVQM GCGIAIGFYF GWQMALLTAV IFPLSAVTQT LQRKYIRGRA AADAKEMENS
      901 GQIAMEAIEQ IKTVQASTLE HRLYNQFCLH LDRLHSTNKR KSIIQGLCYG FSCSPQMFLM
      961 AASFRLGGWV IFPCSFAASG LGYAAAYFPE YVKATFAAGL IFNMLKEEPL IDGMTTSGKK
     1021 PSIAGAIVLK NVHFKYPERR DVPVLCGLNI EVNPGETLAL VGPSGCGKST VISLLERMYD
     1081 PMEGVVAVDG NDLREVNPSH LRSHMALVSQ EPILFDISIR DNIVYGLPSG SVSDEEIHDA
     1141 ARRANIHKFI TELPDGYNTR AGEGGTQLSG GQKQRIAIAR ALIRNPNILL LDEATSALDT
     1201 ESEKLVQEAL DKASEGRTCI IVAHRLSTIV NASCIVVVKD GSIVEKGTHQ ELMQAKGAYW
     1261 ALTQKQSAAA AN
//