LOCUS WKY07418.1 280 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4244
PROTEIN_ID WKY07418.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007121"
/note="NIPPO_CHRIV.G10961.T2"
intron_pos 15:0 (1/7)
intron_pos 65:0 (2/7)
intron_pos 103:1 (3/7)
intron_pos 155:0 (4/7)
intron_pos 198:0 (5/7)
intron_pos 237:2 (6/7)
intron_pos 258:0 (7/7)
BEGIN
1 MKLEIMVLML LRGKANIPEI MAMGTCPTGH FIILELVGRN LSDLRRQLPH RKLSPGSLYR
61 AMLQVTHALS LVHGAGFLHR DLKPSNCCVG VDDVSRIYLL DYGLARQYLD SAGQIRKPRE
121 SIGMRGTMRY VSLEAHARHD LGPNHDLVAL LYSIIELGDG RLPWTKMREE PAIKASKQET
181 TAEKLCEKQP KMLKMAEYVL GMKYETMPDY DRLIKMLEAC HPPDVKSTDP YDWQTTTCQL
241 EHFVRREKAD AEPAEEKPGA DAKKEPLMAS IPSEMDKAKH
//