LOCUS       WKY07396.1               698 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4220
PROTEIN_ID  WKY07396.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007107"
                     /note="NIPPO_CHRIV.G10947.T1"
     intron_pos      12:0 (1/15)
     intron_pos      73:0 (2/15)
     intron_pos      121:0 (3/15)
     intron_pos      148:0 (4/15)
     intron_pos      191:0 (5/15)
     intron_pos      259:0 (6/15)
     intron_pos      317:1 (7/15)
     intron_pos      366:0 (8/15)
     intron_pos      406:2 (9/15)
     intron_pos      433:1 (10/15)
     intron_pos      496:2 (11/15)
     intron_pos      536:2 (12/15)
     intron_pos      574:0 (13/15)
     intron_pos      597:0 (14/15)
     intron_pos      637:0 (15/15)
BEGIN
        1 MFCRRSKLAI TVLFIGAGVL TIFGTYELAT RSSFGHVRVR QVPATDNKRY QFHPFENSCK
       61 FPLPNIYAKD VAGWFSGERL RQLQCPYEDV DLATMDSEGY MYVHPHHAHY KNVMNDIKCK
      121 VVFVEGGIRD NTTKLGHKTI VEVATFEAPE NTRFYANGDV YFIRCFNNAT QQVFQKIFAG
      181 MRDLQREKNK IYITDDMESF DQFGGRRKNP STKEKPNRYS IDILTIDSTS RTMFMRHMPR
      241 TVEMMTRLGY EMFYGYTKVG DNSMVNLEPI LAGDIPEALV EPMNDTSGDI NPQWILPTNK
      301 ALDPSLLPFL SKIMEKEYGC KTMFNDDIGT ADRGIFHYPS GEFQPGFTTP PADHYYRAYY
      361 LALYKNWTYG PCKDGGQIQR EFFELWRRFA QRYKDICHFG FTFITTLTHE DGYRLETMDE
      421 YLRSSLENLH ITGALDNSVS IIMGDHGNRI GAIQFSYTGR IEERMPLMAI RLPSDFKQLY
      481 PMEYNNFLTN KWKLTSNFDI HKTLQDVVRM SFGKKRTGSS SNGRGISLFD EISANRSCRD
      541 AYIAENFCTC LIKRTIGNQS KDEIKKREEL NKKKFKDTIT AWLRVNGLKK CFNYDKITIG
      601 KEAATLGINP LVRHGLRSKA KTDEVESARK KEPRMDYLYH EFVASIPTHD SQSMELLFRI
      661 EEEVATGVFN VAFEPSIRKS LPTCQEFSVF DVCDCLKS
//