LOCUS       WKY07318.1               786 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4142
PROTEIN_ID  WKY07318.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007061"
                     /note="NIPPO_CHRIV.G10901.T1"
     intron_pos      41:1 (1/19)
     intron_pos      92:1 (2/19)
     intron_pos      143:0 (3/19)
     intron_pos      175:0 (4/19)
     intron_pos      209:2 (5/19)
     intron_pos      240:0 (6/19)
     intron_pos      274:0 (7/19)
     intron_pos      302:2 (8/19)
     intron_pos      323:1 (9/19)
     intron_pos      381:2 (10/19)
     intron_pos      444:1 (11/19)
     intron_pos      495:0 (12/19)
     intron_pos      527:0 (13/19)
     intron_pos      561:2 (14/19)
     intron_pos      592:0 (15/19)
     intron_pos      626:0 (16/19)
     intron_pos      654:2 (17/19)
     intron_pos      701:0 (18/19)
     intron_pos      752:0 (19/19)
BEGIN
        1 MGHVLNRLYV FCGAVLVILG AVHIMTASKV SGPTVFTPMI EQISSCLPFH DFLEIHAKII
       61 DLSYREHNGS ISPMAAYAFP DYSHLKQITG RAPKYRLSHC LSPLYGNGTK WLLFTEFVEH
      121 YKLVGVEHFY VYVKDIDGYS KLVIDDYVRT GEIETIFLRT NDRPGVDYQL VAVHDCLHRS
      181 RHHSRYVIFG DLDERIVLSG TATLSDFVTK VMTLHPNVRS VRFRPRYVLY TQAFPNQYQG
      241 NATLNTYLPT LVYHNTSPAQ PVLGDKCIVD PTAVMAMGAH MPSLFFSNYK TFYVPIADAS
      301 IRHIRYPDRR WTKKTLPKIS LYGPWPQNIN ACLPFYELLD IHAKIALRSY AEPRIESLSL
      361 IAAYGFPDYS VITFETQHWK GQKAYCWYLD EEKRQIGPPV ETVIEPEYTA YCCRRYGAHY
      421 MSISSDLPIR ADNYVSVVDR TQDAPKYQLS HCLSPLHGNG PKWLSFAEFV EHYKLVGVEH
      481 FYVYVKDIDE YSNRVLDDYM RTGEIETIFL RTKDRPGGVY LYATIPDCLY RSRHHSRYVI
      541 FGDLDEKIVL SGTVTLSDYI KKVTALHPNV GSIRFRPRFV LQTRGFPRYY RGGATLRKHL
      601 PTLAYHNTTP VQGEFGDKCI VDPRAVMAMS VHKPILFFSS YKTFNVPVAD GFIRHIRKPD
      661 VIWAATKLQR TIFNGKMENT NYPEHLMPIL YQRVKERLER PRVSTLTLSV TLTWKRTQMA
      721 IVLTEFVEHY KLIGVEHFYV YVKDIDEYSA RDCLHRSRHQ SRYVIFGDLD EKIVLSGTTT
      781 LSDYVT
//