LOCUS       WKY07298.1               806 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4121
PROTEIN_ID  WKY07298.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007045"
                     /note="NIPPO_CHRIV.G10885.T5"
     intron_pos      20:1 (1/13)
     intron_pos      69:0 (2/13)
     intron_pos      148:2 (3/13)
     intron_pos      196:0 (4/13)
     intron_pos      255:0 (5/13)
     intron_pos      295:0 (6/13)
     intron_pos      374:2 (7/13)
     intron_pos      418:0 (8/13)
     intron_pos      477:0 (9/13)
     intron_pos      517:0 (10/13)
     intron_pos      596:2 (11/13)
     intron_pos      643:0 (12/13)
     intron_pos      702:0 (13/13)
BEGIN
        1 MFVYPSQYDR DPSTGGANGV TLITPTEATP SFPFWIRFSL SAIGHVLCLG FNVFFCVVSI
       61 VGRHEILNNP FYAIVSIFSL AAVINNTCQL IYIFTVGLGG VSSSVAGYVS ILTELVFTYF
      121 TILLMFFMAL NRYASYSTSH LMTFLIKRKG VCHITVGLLL LSVTVSIAVC KLSGLRREFD
      181 DDMMDDFATN VVPIAISNCV FYTLPVIASV LYFVTYRSLR SQESGAVTDK TKTLLDKAEK
      241 VNMKAGINTL VVYLISLIVN VVMIATKPLG LSILLLFIAQ LLCSTAPQLC LPITNPFYTI
      301 VNIFSLAAVV NNTCQLIYTF TVGLGDVSSS VAGCVSMLIE LVFTYFSILL LFFMALNRYA
      361 AHSTSHLTTF LINRKGVCYI TFGLLLLSVI VSIAVYKLSG LRRGFKADMM SDFATNMIAN
      421 CTFYALPVIA SVFYFVTYRS LRSQELSAIT DTTKTLLDKA ERVNMKAGIN MLVVYLISFI
      481 MNVVMIATKP FSISVLLLFI AQLLCSAAPQ LCLPITNPFY TIANIFSLAV VVNNTCQLIY
      541 IFTVELGGVT SSVAGCVSML FELVFTYFSI LLLFFMALNR YAAHSTSHLT TFLINRKGMC
      601 YITFGLLLLS VIVSIAVYQL SGLRRGFDDM MDDSATNVVP IAIANCIFYS LPIIASVFYF
      661 VTYRSLRSQE PGAVTDTTKT LLDNAEKVNL KAGISTLIVY LISLIMNVVM IATKPFGISV
      721 LLLFIAQLLC STAPQLCLPI TVMIFSKEVR HAAKHTCFYS LKEQFHANNC WAASVGAASS
      781 SNSLPTMLPT NSITTQSRND VVSRDV
//