LOCUS WKY07252.1 1069 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4077
PROTEIN_ID WKY07252.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007019"
/note="NIPPO_CHRIV.G10859.T3"
intron_pos 38:1 (1/27)
intron_pos 63:2 (2/27)
intron_pos 110:0 (3/27)
intron_pos 163:0 (4/27)
intron_pos 180:0 (5/27)
intron_pos 226:2 (6/27)
intron_pos 260:0 (7/27)
intron_pos 316:0 (8/27)
intron_pos 355:0 (9/27)
intron_pos 402:2 (10/27)
intron_pos 448:0 (11/27)
intron_pos 477:1 (12/27)
intron_pos 526:1 (13/27)
intron_pos 553:0 (14/27)
intron_pos 582:0 (15/27)
intron_pos 614:2 (16/27)
intron_pos 640:2 (17/27)
intron_pos 677:2 (18/27)
intron_pos 720:2 (19/27)
intron_pos 748:1 (20/27)
intron_pos 788:0 (21/27)
intron_pos 812:0 (22/27)
intron_pos 840:1 (23/27)
intron_pos 889:0 (24/27)
intron_pos 930:1 (25/27)
intron_pos 964:2 (26/27)
intron_pos 1016:0 (27/27)
BEGIN
1 MYSLTSEEYD SFKNVLFNHY LGCSAYEETG RDFRRGNEKK DADEDGLSTR RRFINNYFSR
61 FLRNGGESKD HFDLKRLRCD EYGIPQDISK RYFVFAQKSF QDPPSTLNHI PPWFIRHFEY
121 AAQLSLDFVN DLKFKKMKEL RASQKELPIA ERRQEILDVL ESNQILIIAG DTGCGKSTQV
181 PQYLLNNGYA GIACTQPRRI ACTALARRVA YETLNSYGSE VAYQVRFDTT KSKRTKMLFL
241 TEGLLLRQME SDSLLQQYNV IILDEVHERH LSSDLLIGLL RDLVGKRDDL KLILMSATIN
301 LELFKEYFNG APVIQVPGRL YPIQLRYHPI KQYIAETEKK SHKIDPEPYV RILELIDKQY
361 PSSERGDALV FLNGVAEITT VAEALKTYAE LTKGWIILML HSTLSVEEQD KVFDVAPTGV
421 RKCILSTNIA ETSVTIDGIR FVIDSGKVNL IKHETSSGTQ KLSEFWVSKA SADQRKGRAG
481 RTGPGVCYRL YSEEQYSKMD DFTSSEIKRV SLQEMALRMI SLNLGLDPRT FPFIEKPEEE
541 KLNDALSTLK FQGVLYPDRD NQLTVLGSAI AKLPVDVAIA KMLVLGCVVN QLEVILTVAA
601 GLSVQSPFTN RSYRELDVVQ RRAHLTSSMG DPLTLIEIFR EWVLMKCSGG KVRRWALENG
661 IDEHRMLEIS KLRFQYRRIL EEAGLIEKPN AHELGEDDSR QRRIDQGDKK KLLDMKRDAR
721 NMEKTRKVLR ADKHFDSILN DLEEEDLENE SDPMKADVKT VEFLLNYKQR DVEKIRRSHR
781 LRRKDAEVIR IIIAAGLYPQ YTLLDTSNKY QHGQELFVHT RMKPFTLIHP NSTIAQYHSE
841 TLDPRSDSEG RSIAHQIPFY GLLLETTKPY ICNVLPVPAA ALLLFAKKVI CDDWKSALID
901 EFVEICFTQE SRCKEVLRDS TQIRAELNRG LHRKLYGFDY DAGELSDLIS KFAYLLANAD
961 IEISLKRMAH PSRSLEDTGF FTPDGEVELD VKEDDYILEN DVVEFKDDEL PEADEVSNVS
1021 KGVRVKKEET GQAERKPTYY ELLQQRMKER ESSSGDQAVE KRPRLENDT
//