LOCUS WKY07246.1 275 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4071
PROTEIN_ID WKY07246.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007016"
/note="NIPPO_CHRIV.G10856.T3"
intron_pos 21:1 (1/6)
intron_pos 100:1 (2/6)
intron_pos 147:2 (3/6)
intron_pos 182:2 (4/6)
intron_pos 227:0 (5/6)
intron_pos 272:2 (6/6)
BEGIN
1 MLVTTVVSLV ALSVVVADAN LLELPEGPSN WDDEQEMRAR IANYSLAKFS FDYHNWEASS
61 SLRLPPTTPV GGRTSRERKK RDGGLVSGPI ATAVVTGMIG MTARTVSELT NFHPSQSEGG
121 CTWFGTAPLC NYPCPSEYDF IRMHNGRCSN MWFSGFCTPD DSFGKPCTTV LGSYFHKRFC
181 CKSDPTDCTW SGRWMGANTA HNIYCRYDNV GKCGSIDCAI NHYTLKAQNS SDIYGDRCDR
241 LDLFGLKGKA TCGYIAWFND DGEIVNSWYK TSKTH
//