LOCUS WKY07189.1 315 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-4014
PROTEIN_ID WKY07189.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006981"
/note="NIPPO_CHRIV.G10821.T1"
intron_pos 58:0 (1/6)
intron_pos 99:2 (2/6)
intron_pos 128:0 (3/6)
intron_pos 170:1 (4/6)
intron_pos 228:0 (5/6)
intron_pos 279:0 (6/6)
BEGIN
1 MARYDYLPRY GLENYSLILP MEDSFDAVRS TVWMQESWQH SVSFSVGYVA LIYAGQKVME
61 GRKPFGLEMP LFLWNLGLAL FSLLGFVRMT PEWLWSWKDN SFVYSVCTAS YAQGVTGFWT
121 EQFAMSKVAE LLDTAFIVLR KRPLLFLHWY HHVTVLIFTW HAYKDHTASG RWFIWMNYGV
181 HALMYTYYAL RALRLRLPKQ VAMIVTVLQI SQMVMGITIG VVVYRMKSAG NSCQQTWENL
241 GLCFMIYFTY FLLFCNFFYH AYLKKNNRYT AGTKPASKEE TKSLEKELKQ DINANISEVS
301 VVTRSTARRR AQKVD
//