LOCUS       WKY07181.1              1004 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4005
PROTEIN_ID  WKY07181.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006976"
                     /note="NIPPO_CHRIV.G10816.T1"
     intron_pos      58:0 (1/20)
     intron_pos      105:0 (2/20)
     intron_pos      127:2 (3/20)
     intron_pos      151:0 (4/20)
     intron_pos      175:1 (5/20)
     intron_pos      213:0 (6/20)
     intron_pos      254:2 (7/20)
     intron_pos      295:0 (8/20)
     intron_pos      367:0 (9/20)
     intron_pos      648:0 (10/20)
     intron_pos      678:1 (11/20)
     intron_pos      704:0 (12/20)
     intron_pos      745:0 (13/20)
     intron_pos      798:2 (14/20)
     intron_pos      843:1 (15/20)
     intron_pos      879:0 (16/20)
     intron_pos      900:0 (17/20)
     intron_pos      919:0 (18/20)
     intron_pos      942:0 (19/20)
     intron_pos      990:1 (20/20)
BEGIN
        1 MDVFKRFSAI EGPPQRIVAF AILSTMRRFS GFVLLLFAFT RTVHADPPFA SFSAPLQRNQ
       61 PRANERVHRP MLLLSNDGPI IDIAVPEEQR LFGRAAHGVV ERRSSVPEST RILRNYLGAQ
      121 EPPGHRGIGQ SEDSAMEISV TDHTAGNISS PSLNYRPPPP PVRREVDLEP RCHYDTDRWA
      181 LHMESSLSHA VMFERRTGGS CGDCLRGCAM KQGGPWTCRS IVYDYNWQIC DMFAVAGTSP
      241 PFVLVEYEGR DYFEYLAANP PSDVDFAQAN DFTLQEQNKT ETQLQSCNSA AVEKAPVARS
      301 QKDGPTTTES KADERTSYGA TPVQDQLQAE EAENKIKEKE KKRKMRKLLK VAKEQLANSP
      361 LFKELQGSVT DTSEARTIMP ELETTMSKHH DDKLSTTSSS TEESTRIPDI LVHKKIDEPL
      421 HPSEKVYRRK EAKKTKTKKS SKDSRKSRGS GEFLRSPKRK SSKADKSKKS REIDEVEPPS
      481 TSESPNVKLT DEEISEKLKR KQRRMEKLTR MFRRKPTKSR GITTSTTTTT TTTDSIETSP
      541 ITEEPEVMSA KVARVKIELY QQRKAAERAA RASAPGRQRI RLREDGRMIG QEKDETVEDS
      601 RERIPSQRVE EVKDEEQEEE EEVSTTTTTA TRKPPRRKHT AKSRRPKTAT TTATTESVTA
      661 ESTTASPSTT TTTVPPREIS RDDLRKALTK EIKKFISKEF RGKGFRAHGT RTLTGIEDIT
      721 ADLTDGSTSE SDARIPSSDV SRRKPEQLLA LNVCENDEQV VMISFPSSTR KPYTVAVETV
      781 RTNDYRECLE ECEQNSDCSS AVFTEFVCEM STTRARHFIP DIRPASNQTY IEKACVDKKL
      841 VKGRSTHLTG VANHILAGFV EQVEDAYGIE QCIASCYGAL KRYGFQCMSA MWYPMDKNQN
      901 CLLNSETRRS QERLFIPEDT GHMMVYFEHP DALFMRRLHD ELPEKRTQRS DQRWTSWSSC
      961 NENKQRVRYQ KCAEQKDVRK CTKETVSCDG STSTQGTTTV AKEE
//