LOCUS       WKY07114.1               871 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3939
PROTEIN_ID  WKY07114.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006933"
                     /note="NIPPO_CHRIV.G10773.T1"
     intron_pos      51:0 (1/20)
     intron_pos      106:0 (2/20)
     intron_pos      145:0 (3/20)
     intron_pos      191:0 (4/20)
     intron_pos      248:0 (5/20)
     intron_pos      278:2 (6/20)
     intron_pos      326:0 (7/20)
     intron_pos      370:2 (8/20)
     intron_pos      415:0 (9/20)
     intron_pos      469:0 (10/20)
     intron_pos      502:0 (11/20)
     intron_pos      535:1 (12/20)
     intron_pos      589:0 (13/20)
     intron_pos      631:2 (14/20)
     intron_pos      675:1 (15/20)
     intron_pos      703:1 (16/20)
     intron_pos      747:2 (17/20)
     intron_pos      784:0 (18/20)
     intron_pos      805:2 (19/20)
     intron_pos      848:2 (20/20)
BEGIN
        1 MAASSDSVKF LQLRNGDRIN VNSYCSITHA DDSKLPSDQK SAAVLQSYKE HFKVGGVSVP
       61 VAEFKTVDSH VSALPAQKRP DQLIKFVEKT KSDFDRMIEY DCDEEDYLWI RSINKERKKN
      121 KSGIIMPEQM EQVMDRLEKE SHFEVKGSPT SMMPGSSMDG DDVCCVCGDG DVNNVNQIIY
      181 CDMCNIAVHQ DCYGVPYIPE GQWLCRRCKL SPSAQVECCL CPNTSGAFKQ TSDGRWAHVI
      241 CAIWLNEVHF GNLVFLEPIE GVDNSLERRC KLKCLVCRKK MGACLQCSTR SCLKSFHVTC
      301 AQQSGMTMKI ESSMDPNNSE VMDVQRFVYC HLHADDDESD PVARKKRMDE AIRRARRSMS
      361 AKTCKTPSVN MPTLSSESLE TIKKMAGFDI EDIVQYWYLK RKSRCGVPLI RRLQLNQKVS
      421 RASAFPTSEL AQEDQRVYEQ FMMRRVSLET TRLLCEQVKK RESHKRSHRK VSALLMSALL
      481 KPISLVLEEL IERMAEKDKE KVFTSPVTVE GYRDFIKHPM DISTMRKKLE KGKYDSIAAL
      541 RTDVLLMTDN CEKFNLENPY FLQYGRKFRK IALGMLDKEE ERERSLEKLL SSEGDRSLLK
      601 EVSCVGLYDV LETEIVRDES EQESEVEKKQ RPGRPRLVKE AAPAPAGPKE AVGGLGLGSF
      661 LNQKEGTGGL FTLNGATPRP KRKNSPVDKS ASQKKRRKDG NFPSIKSPFR QSPITKFLTA
      721 TSATRRSTLR QHGSTPLMAF RDNSVKSPLA AEIASSESSA EEEDGRTIRR RGRLGDNAKI
      781 NIHDINDFNS FQHNDLVVVN GVAGRVIDPI DARLDGALPS ELVSECRTSA HRKNPLICVF
      841 LFENENKWGG IRSVISGIWI AMMTCPRRPS T
//