LOCUS WKY07067.1 334 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-3892
PROTEIN_ID WKY07067.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006901"
/note="NIPPO_CHRIV.G10741.T1"
intron_pos 25:0 (1/9)
intron_pos 62:1 (2/9)
intron_pos 114:2 (3/9)
intron_pos 167:1 (4/9)
intron_pos 187:0 (5/9)
intron_pos 217:1 (6/9)
intron_pos 253:0 (7/9)
intron_pos 270:0 (8/9)
intron_pos 290:0 (9/9)
BEGIN
1 MSLPNPQDCF SKVRNTKQNK NNRKEKQLRI LEMLLWQLVF VVGLLTSNSL GVLNGVPSTL
61 YGVKHCNSDT RPLASVISRF PNIPDGQAMI CGGVVITPNT ILTAAHCVND GNTFPSMVTV
121 TLNEGTSSSS RLRQFTRAID LHSGYSEASH PLFNLRLTAA TLFSSGRPQI ARLPPLPHDD
181 TEAPAMSLHF NPAKNPILDK ELETSFCFAT GWGITEDGTY SDTPQNIYLR VKRENSDDLF
241 GYPINIASKA CKGDSGSPVY CYVRGVKYLI GVMTDVGTYK EIKRSANDEM RCEDYDFVVI
301 ADIRDNIDEI RSILRRRGLL DSLATGQRLC HNVL
//