LOCUS       WKY06828.1               966 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3653
PROTEIN_ID  WKY06828.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006760"
                     /note="NIPPO_CHRIV.G10600.T1"
     intron_pos      33:0 (1/24)
     intron_pos      91:0 (2/24)
     intron_pos      119:0 (3/24)
     intron_pos      167:0 (4/24)
     intron_pos      222:0 (5/24)
     intron_pos      250:0 (6/24)
     intron_pos      299:2 (7/24)
     intron_pos      331:2 (8/24)
     intron_pos      374:2 (9/24)
     intron_pos      399:2 (10/24)
     intron_pos      426:0 (11/24)
     intron_pos      490:0 (12/24)
     intron_pos      539:0 (13/24)
     intron_pos      572:1 (14/24)
     intron_pos      601:0 (15/24)
     intron_pos      627:0 (16/24)
     intron_pos      669:2 (17/24)
     intron_pos      694:2 (18/24)
     intron_pos      724:2 (19/24)
     intron_pos      766:0 (20/24)
     intron_pos      793:2 (21/24)
     intron_pos      846:2 (22/24)
     intron_pos      866:0 (23/24)
     intron_pos      896:0 (24/24)
BEGIN
        1 MSADFGWRRF NFFDKSVVQD PENPKEKFHG LKDVCVDCWC SGVGGDAVYL GEQRGGVFRL
       61 GRDLDENYWK AYQTSLTALH VADEFIFSIG EDEEEANSML KVWKGGSFEK GVPVLCREIR
      121 INSIHPVSHS SVPACAVAVH SSLSAIAIGF VDGTVLLYQG HVLKDKAMTS RWQRIREPSP
      181 LDGAVTGIAL AQLPGEKLVV FVITSKVVNS YVIENRSVVN TLKHDADGAT KDCWTFDERI
      241 GSLVVASRDM VYFYEADADG YRGRCLQLGR QLGRNHEKLQ LISVGEHLVL LTKQHALIHS
      301 SDETEFMSMV TVYNVKGQYV GFSCSIPSLC RLFTLDQSLM ILGKDGTLSK LTEKNLNAKL
      361 DILFKKNLFD VAVILAKNNK DGAEHLKSIH AKYGDYLYGK SDFDGAIHEY KETIGMLEPS
      421 YVIKRYLEGS RLRQLCVYME ALHETQKYNL HHTSILLHCY AQLEEREKMM KFLEKLSTDG
      481 RTDMAAVFDV LRSLKLSADA SLFAVKLNMH DRALSMMVED LGRHATAIKY IAKRPPVEAC
      541 GFVEKYGRVL FEACPDETIG LLQSIIESSS GDDVDPAQLL KVFVSDFTKA SSFIEFALKQ
      601 VAGPSRSVLL DAMLELRLRD YAEKKMSDAD CAKQLIPFIE NDNMTRALHL ARLFHCTPVM
      661 QHILLKLGRK EELLRYYLED NKLREAIELC KSERNKDMWL DTLVHVSKME SAVDEGLVVS
      721 MLEGIEADGN LQPLVVLEIL SRSSQLKVAA IKSYVVRWLD AKKKQIDSDR KAIVDGERRV
      781 EEIDKQIESL KFNVQVLQVN KCSACDTALQ LPAVHFLCRH SYHVHCFESY SEKPDVCPAC
      841 VGPVSREVVK ENLNDRAAYQ KFHKELNGAV NGLDVISKYL RKGAFDPPRK TSQRKSLNAS
      901 SPNDSRSAMN PFEDEDELNP FAEACSLSTK SSDSASRRSA GGKSSTIQRY DNSKNPFKGS
      961 TNPFDE
//