LOCUS WKY06715.1 282 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-3541
PROTEIN_ID WKY06715.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006695"
/note="NIPPO_CHRIV.G10535.T2"
intron_pos 23:0 (1/8)
intron_pos 56:0 (2/8)
intron_pos 87:1 (3/8)
intron_pos 111:0 (4/8)
intron_pos 149:0 (5/8)
intron_pos 188:0 (6/8)
intron_pos 215:2 (7/8)
intron_pos 248:0 (8/8)
BEGIN
1 MKEQSLRASE ILAHARRRAR KQEEFDRGGF HFTAVWDHIL ESQCSHHETG DTACSRCLFE
61 RSLMLPELPE MVFPNNTLTI AFTRYPGCSI QFNALDALKM VSADVLPDVQ VAPSTTWQES
121 RRGIAEKAAH PFDWTFTSKY AGTVCGCSVE PTDEIIDVER LKRQEPIGFY SQMTLYEDEL
181 ADHGTAEMTV RLRAMPTFFF ALMRFYLRID RVLIRVCDTR ILGDNDQGYI LREWSIREAK
241 IADLGHLPPE ALLDANQVWP SLPLLESRSE KIIPLLSEVS SS
//