LOCUS WKY06595.1 287 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-3421
PROTEIN_ID WKY06595.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006631"
/note="NIPPO_CHRIV.G10471.T2"
intron_pos 20:1 (1/7)
intron_pos 65:0 (2/7)
intron_pos 90:1 (3/7)
intron_pos 128:1 (4/7)
intron_pos 167:1 (5/7)
intron_pos 212:2 (6/7)
intron_pos 254:0 (7/7)
BEGIN
1 MRAHRSSPPQ MAARRSLTID APVDPVYLAL KQATGKYGGR RRSSANNFDS NTPSPGNLSQ
61 ASLQDSGYAE MSAVRTNPML GSTPQLDNSG RSTGRRRAPK LSTQMKSLSL DCQEMPPRIN
121 AANRSPMRTK LMGSHLRGKN GSSDLSDWDR SCSPCNGNSR RGSAAATLSG GYVVIHEYAP
181 TNGAAPLLLG ERVHVVDNGD PDWLHGFREH DRTERLLSFP ATCVAMVQPG EQAMKILQNV
241 AVPEIKLRLY RDQVVFAQPD SLHDGKVTVR TAHNAFASCP LTSLALV
//