LOCUS       WKY06532.1               710 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3359
PROTEIN_ID  WKY06532.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006594"
                     /note="NIPPO_CHRIV.G10434.T3"
     intron_pos      37:2 (1/17)
     intron_pos      98:2 (2/17)
     intron_pos      136:0 (3/17)
     intron_pos      169:0 (4/17)
     intron_pos      198:0 (5/17)
     intron_pos      224:0 (6/17)
     intron_pos      251:0 (7/17)
     intron_pos      297:2 (8/17)
     intron_pos      336:2 (9/17)
     intron_pos      389:0 (10/17)
     intron_pos      440:0 (11/17)
     intron_pos      474:0 (12/17)
     intron_pos      507:2 (13/17)
     intron_pos      529:2 (14/17)
     intron_pos      581:0 (15/17)
     intron_pos      617:0 (16/17)
     intron_pos      679:0 (17/17)
BEGIN
        1 MNLIFASQLS TEREIVDLEH ETGRAFFNSM DSFFAYGLLS GDKVYWRFVR EFLPKTQQQL
       61 LRAEWGDIDN RRLSLAWLKD AFNKGTLHFQ MLAFKNNRKF IERFYHRNAC MCNGGMLEAV
      121 TDMIMSLVNV QFAFYSTLNL REEPAQAVIV EAPVTQFVTA RAKRRKRTES LRNQPPVLND
      181 KTPSDLSDTA APSSIDQDAI LDELMRIRRN RLHGIEETPS KEKVQENSDS GMTTSGNSSG
      241 GTVKTEGFEE VVRKTMSLVR MENLGEEPKS FDSLLQYDEF PVEKSPDDDT LIEGEVVLHS
      301 GDILKLAMNV YVDEGERLIS MYHVFQGFTA GTPQQRLLAV TDHNMYVISQ NHIEDHSSNG
      361 GVYEEGCHNN VFYEVHVVIS LPSIDYIGVS PDSQVLTFYA KAGAPFHLKA DAEGLRDRAC
      421 AIATGDVSLG NAIVKSIITA FESGKHEPPP VFTDSTPYSL IIKRYLTKEL NGSPHIELRH
      481 FALAFWKESS ASAGKPSSES VGYLYRRMIH PNWWRKPPAE WTQSYVVLSD CTETHELDSK
      541 KDCQWGFELV LPDGNLQLQC PSREEMSKWM QLVNIALNSQ SDHDAAACMV MVTDSNMVVA
      601 QEGEKCYTDG FIRTLVSFPL PDIRCGWYLR TESHMVLILR VDAMFQWFFF RTNEELNRIV
      661 KVLIDYPIPL VEITHNSQEK VASYVFGQCH RMVDLWHKTI FATEGFESES
//