LOCUS WKY06504.1 1511 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-3327
PROTEIN_ID WKY06504.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006582"
/note="NIPPO_CHRIV.G10422.T3"
intron_pos 3:0 (1/91)
intron_pos 17:0 (2/91)
intron_pos 31:0 (3/91)
intron_pos 45:0 (4/91)
intron_pos 59:0 (5/91)
intron_pos 73:0 (6/91)
intron_pos 87:0 (7/91)
intron_pos 101:0 (8/91)
intron_pos 115:0 (9/91)
intron_pos 129:0 (10/91)
intron_pos 143:0 (11/91)
intron_pos 157:0 (12/91)
intron_pos 193:0 (13/91)
intron_pos 205:0 (14/91)
intron_pos 219:0 (15/91)
intron_pos 233:0 (16/91)
intron_pos 247:0 (17/91)
intron_pos 307:0 (18/91)
intron_pos 321:0 (19/91)
intron_pos 335:0 (20/91)
intron_pos 360:0 (21/91)
intron_pos 374:0 (22/91)
intron_pos 388:0 (23/91)
intron_pos 424:0 (24/91)
intron_pos 436:0 (25/91)
intron_pos 450:0 (26/91)
intron_pos 464:0 (27/91)
intron_pos 478:0 (28/91)
intron_pos 492:0 (29/91)
intron_pos 506:0 (30/91)
intron_pos 520:0 (31/91)
intron_pos 534:0 (32/91)
intron_pos 548:0 (33/91)
intron_pos 582:0 (34/91)
intron_pos 596:0 (35/91)
intron_pos 610:0 (36/91)
intron_pos 624:0 (37/91)
intron_pos 638:0 (38/91)
intron_pos 652:0 (39/91)
intron_pos 666:0 (40/91)
intron_pos 680:0 (41/91)
intron_pos 694:0 (42/91)
intron_pos 708:0 (43/91)
intron_pos 722:0 (44/91)
intron_pos 736:0 (45/91)
intron_pos 750:0 (46/91)
intron_pos 764:0 (47/91)
intron_pos 778:0 (48/91)
intron_pos 792:0 (49/91)
intron_pos 828:0 (50/91)
intron_pos 840:0 (51/91)
intron_pos 854:0 (52/91)
intron_pos 868:0 (53/91)
intron_pos 882:0 (54/91)
intron_pos 896:0 (55/91)
intron_pos 910:0 (56/91)
intron_pos 924:0 (57/91)
intron_pos 938:0 (58/91)
intron_pos 946:0 (59/91)
intron_pos 973:0 (60/91)
intron_pos 987:0 (61/91)
intron_pos 1000:0 (62/91)
intron_pos 1013:0 (63/91)
intron_pos 1027:0 (64/91)
intron_pos 1041:0 (65/91)
intron_pos 1055:0 (66/91)
intron_pos 1069:0 (67/91)
intron_pos 1083:0 (68/91)
intron_pos 1097:0 (69/91)
intron_pos 1120:0 (70/91)
intron_pos 1133:0 (71/91)
intron_pos 1147:0 (72/91)
intron_pos 1161:0 (73/91)
intron_pos 1175:0 (74/91)
intron_pos 1189:0 (75/91)
intron_pos 1203:0 (76/91)
intron_pos 1217:0 (77/91)
intron_pos 1231:0 (78/91)
intron_pos 1254:0 (79/91)
intron_pos 1267:0 (80/91)
intron_pos 1281:0 (81/91)
intron_pos 1295:0 (82/91)
intron_pos 1309:0 (83/91)
intron_pos 1330:0 (84/91)
intron_pos 1338:0 (85/91)
intron_pos 1353:0 (86/91)
intron_pos 1372:0 (87/91)
intron_pos 1396:2 (88/91)
intron_pos 1421:1 (89/91)
intron_pos 1453:0 (90/91)
intron_pos 1486:0 (91/91)
BEGIN
1 MKDDGCATPR EPTPRLDDNT CTAPEPTPRP DEGCATPREP TPRVDENTRT APEPTPRPDE
61 DCVTPREPTP RLDENTRTVP EPTPRPDEGC ATPREPTPRI DENTSTAPEP TPRPDEGCAT
121 PREPTPRIDE NTRTAPEPTP RPDEGCATPR EPTPKPDEGC MTATETPISP GTRRREKITE
181 VVTTRTVERT ITDVRTPREP TPKPDENTCT APEPTPRPDE GCATPREPTP RIDENTRTAP
241 EPTPRPDEGC ATPQEPTPRI VNVLFFCAAF SMTPYFLQSA LHKRSQSSCL FQDDNTRTAP
301 EPTPRPDEGC ATPQEPTPRI DENTRTVPEP TPRPDEGCAT PREPTPKIVN ILSLYAFLSD
361 ENTRTVPEPT PRPDEGCATP REPTPKPDEG CRTATETPIS PGTRRRTKVT EVITTRTIER
421 TITDERTPRE PTPKPDENTC TAPEPTPRPD ENCMTPREPT PKLDENTRTA PEPTPRPDDN
481 CVTPREPTPK PDENTRTAPE PTPRPDEGCA TPREPTPRFD ENTRTAPEPT PRPDEGCATP
541 REPTPRIDEN TRTAPEPTPR PVSLYLVCLT RIFIIYAFRT KDENTRTAPE PTPRPDENTR
601 TAPEPTPRPD EGCATPREPT PRIDENTRTA PEPTPRPDEG CATPREPTPR IDENTRTAPE
661 PTPRPDEGCA TPREPTPRID ENTRTAPEPT PRPDEGCATP REPTPRIDEN TRTAPEPTPR
721 PDEGCATPRE PTPRIDENTR TAPEPTPRPD EGCATPREPT PRIDENTTTA PEPTPRPDEN
781 CVTPREPTPK PDEGCKTAAE TPISPGIRRT EKIKEVVTTR TIERTITDVR TPREPTPKPD
841 ENIRTAGEPT PRPDEGTRTA PEPTPRPDEN CVTPREPTPK PDEGTRTAPE PTPRPDENCV
901 TPREPSPRPD EGTRTAPEPT PRPDEGTKTA PEPTPRPDEG CRTAEVPTPR THSRKETTRE
961 VVTTRTIERT TTDERSRITS GRTPTPDEPC ITASEPTRAD AGCCTPREPT LIDEGCATAP
1021 ELTPRPDEGC STTREPTPIP DEGTTTACVP TPKPDEGCST TREPTPKPDE GTRTACVPTP
1081 KPDRGCQTAS EPTPKSAPTS RTETITEVVT TRTIERITTD NTRTACVPTP KPDEGCSTTR
1141 EPTPKPDEGT RTACVPTPKP DEGCSTTREP TPKPDEGTRT ACVPTPKPDE GCSTTREPTP
1201 KPDEGTRTAC VPTPKPDEGC STTREPTPKP APTSRRETIT EVVTTRTIER TTTDNTRTAC
1261 VPTPRPDEGC STMRELTPKP DEGTRTACVP TPKPDEGCST TREPSPKPET KVKPESEPSV
1321 RKSSRERKPK RITKITTQKE VVEKRILEIK TVESVLSSSD KAVTNASEVT TDAFRRTFTQ
1381 SSPREYTARS PHKSDGWDTG PTSATCVCAS RNTAEQSTKQ GSPRRYRFVV PMVVLAKIRG
1441 KPYRLTTHYT VVDDHPQLDF EPLEIKFNGK RLWESTSAQK IDLDAVTNCS TGEGTFSEHS
1501 PIKRCNRSHN A
//