LOCUS       WKY06448.1              1053 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3272
PROTEIN_ID  WKY06448.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006551"
                     /note="NIPPO_CHRIV.G10391.T3"
     intron_pos      65:0 (1/23)
     intron_pos      98:2 (2/23)
     intron_pos      132:1 (3/23)
     intron_pos      172:2 (4/23)
     intron_pos      217:0 (5/23)
     intron_pos      261:0 (6/23)
     intron_pos      314:0 (7/23)
     intron_pos      341:0 (8/23)
     intron_pos      380:1 (9/23)
     intron_pos      415:0 (10/23)
     intron_pos      446:0 (11/23)
     intron_pos      478:1 (12/23)
     intron_pos      510:0 (13/23)
     intron_pos      557:2 (14/23)
     intron_pos      617:0 (15/23)
     intron_pos      668:0 (16/23)
     intron_pos      717:0 (17/23)
     intron_pos      746:0 (18/23)
     intron_pos      858:0 (19/23)
     intron_pos      906:0 (20/23)
     intron_pos      939:1 (21/23)
     intron_pos      965:2 (22/23)
     intron_pos      1005:0 (23/23)
BEGIN
        1 MSGDGPAEQH YSTSVGVDEN GDVVYHHEGG VRVFGQEQHL IRMEDGRIVE MIEQGQEHEL
       61 QYDEMHDIKR DETQEKKIVL GPPVKWKKVV NSSGPSPRPR HGHRAVAIRD LMIVFGGGNE
      121 GIVDELHVFN TTTKQWFVPS VRGEVPSGCA AYGIVCNGTH IFTFGGMVEY GRYTNDLYEL
      181 QASRWEWRKL RPRPPRSGGS GPCPRLGHSF SLASNQICYV FGGLANDSND PKQNAPVYLD
      241 DFFSIDVRGP VGSLQWEQPV TYGARPPARE SHSAVVFETD ARRQLIIYGG MNGSRLNDLW
      301 MLDLDSMTWD NPMVGGLTPM PRSLHTANLV GHRMYIFGGW VPLSEDGNEI DVKEWKCTND
      361 LSCLNLDTLV WESASHVFDE NMPRARAGHC SAVINNRIYM WSGRDGYRKA WNNQVCCKDM
      421 WYLETSVPGT PSRVQLVRAS VAGLEVSWGS LPTAEAYLLQ LHKYDSSATN LKTVDDEASR
      481 QVTPLGKASS LQSHKMVVQR GTSAGNVMKV VRGTGSGQQI LRVVRQVPGV SGNPISTVKP
      541 GPGAKAIFFS KGGAQQKVMY VQGNVPSAVV LARGGAPVGA GVEQPGSLAM APHQQPSIST
      601 QGTTYTAPSN SRPHDEAALP QNLFDELPND DQSPPSPPKQ RPAVSGESSL PPETEPPHLS
      661 LERPSSQDAP QDPQCHSEST ATNETQPMVP SDPVQDMVPN PVQDAKGPSA AQAPLENDAA
      721 SFVSDPAGTV AQAQPCGSQE KLQDQSSSFP ADPPLVTQQS HGGNGDVTST SRESDQPISS
      781 AAMPQQAPSV SEANTNARGQ RESIESPAAE QAVQNYQAVK QGPEEELWHD VGIIKGTSCL
      841 VTHYFLPGEQ SLESTYGTDF DVGMHAGQVN FLRKAELEPG TAYRFRVAGI NTIGRGPWSE
      901 VSAFKTCLPG FPGAPSSIKI TKGQEGAQLT WEPPQNVAGR ISEYSVYLAV RNTSGTSDNQ
      961 LAFMRVYVGV EPECIVNQSN LAAAYVDQSA KPAIIFRIAA RNEKGYGPAT QVRWLQDQKP
     1021 VMAPSIAPPS AATTARYPVG YYSQPKRHRI DQL
//