LOCUS       WKY06344.1               700 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3169
PROTEIN_ID  WKY06344.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006500"
                     /note="NIPPO_CHRIV.G10340.T2"
     intron_pos      17:1 (1/19)
     intron_pos      62:0 (2/19)
     intron_pos      109:1 (3/19)
     intron_pos      134:0 (4/19)
     intron_pos      203:1 (5/19)
     intron_pos      242:0 (6/19)
     intron_pos      271:2 (7/19)
     intron_pos      298:1 (8/19)
     intron_pos      322:0 (9/19)
     intron_pos      341:2 (10/19)
     intron_pos      382:0 (11/19)
     intron_pos      442:1 (12/19)
     intron_pos      470:0 (13/19)
     intron_pos      507:0 (14/19)
     intron_pos      550:2 (15/19)
     intron_pos      593:1 (16/19)
     intron_pos      628:2 (17/19)
     intron_pos      656:0 (18/19)
     intron_pos      675:2 (19/19)
BEGIN
        1 MYSIFLITVF GVSIAYGALC IGDNTTTYLR SEGTRLMEFA THTIKNVTLN MCASACTSRR
       61 EGHECSSFEY DARSQECSMH TEDGQPFGPS VITKTDGPIA FFQQVCVKGD SLCSTPYGFE
      121 RFPQSVLIGH AMEVLTTSSL SECLSRCLTA GATSQAQCRS VMFFYETGEC IMNRERRTDK
      181 PDLFMEGVQD RLVDYFESNC HDVHCFTGQL HWIRTEDYFI SHEKDVVIES MGIDECRAVC
      241 QENLVGAEKF PCRAFVYNAA KKECHLTAES GYTGRRRNSF NLNPISSGEY FEKYCLQVPF
      301 TCLEASFEQV ADRKMTTVPY KEFGSLSVHS CLAGCLNDGD KIFARCRRRR SSHTQNCSLK
      361 RRTTTISTKF VTPFQHQNVV RTSLGLEDID EVSRAVTFTD TSTSAIEVGQ NVVGRKEAET
      421 IGTVVDDTAD FQGEPSPAVK ARLTSECRMS GVTVKVEFAS STSGNLYIKE NFANCRTEFN
      481 NASAVELHIP FPESDDPDPR CPGIEIAPSV WSFPIVVQRN DVSAPSVVTS VDRIFNVTCD
      541 YADLIDKEGS PIVPSDDPND EAKSSRIEMQ ILRHGQPVTT VPLGEEVELR WKIVNQSSGL
      601 GYFVDNCAAE RVGGTPPQPE PLQIIEHGCP DKRVEKRLIK SPVVPVSDGF STKMKIAPLK
      661 IGMSHFRKQL IVPSRFFDST VPGVFASVAP LTSALRAAHR
//