LOCUS WKY06264.1 317 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-3088
PROTEIN_ID WKY06264.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006451"
/note="NIPPO_CHRIV.G10291.T2"
intron_pos 57:0 (1/9)
intron_pos 111:0 (2/9)
intron_pos 117:0 (3/9)
intron_pos 124:0 (4/9)
intron_pos 149:2 (5/9)
intron_pos 172:1 (6/9)
intron_pos 220:0 (7/9)
intron_pos 273:2 (8/9)
intron_pos 294:2 (9/9)
BEGIN
1 MRSFYDILGV EVSVSSEELK RAYFAYLRKI HPDKNGTSGG LEESVTFATF IWTTLKDPSK
61 RREYDHWLRE QRYRATKGTV VERVEIDSED VDPIQETCRC GDHYVVSPEE VQKIVDFSHN
121 KLEMSSTKIV VVGESGVGKT SFVNALCGKP SADSPSTIGA SIAMVWHEYK AGTSEQRSEL
181 MELWDIGGSG AHRAASTVFL DGAAGVILVH DLSNKKSEEN LYQWISLIDG KPRVSGSTTR
241 SLVADIESCH LPILTVGCKL DLAPHRGPSA YDRMNINSLR PIPPGSTASM ALARFFDETI
301 DRTKAPVNER RRRLQQF
//