LOCUS       WKY06176.1               500 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3001
PROTEIN_ID  WKY06176.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006406"
                     /note="NIPPO_CHRIV.G10246.T4"
     intron_pos      33:0 (1/12)
     intron_pos      64:0 (2/12)
     intron_pos      94:0 (3/12)
     intron_pos      121:0 (4/12)
     intron_pos      143:2 (5/12)
     intron_pos      171:0 (6/12)
     intron_pos      240:1 (7/12)
     intron_pos      281:0 (8/12)
     intron_pos      341:1 (9/12)
     intron_pos      369:0 (10/12)
     intron_pos      394:2 (11/12)
     intron_pos      445:2 (12/12)
BEGIN
        1 MSQLSPGSVS EEDGTTRRVA GSATPDTERS CKVCGDRANG YNFGVLTCES CKAFFRRNAV
       61 REEEIKCPFS NNCGITPASR RFCQACRLQK CFAVGMSRSW LAENKHRVNP RKRSSNPDEV
      121 PSPGEEVSVP KAYLNELIRR AKRPPAFCEC RCTCGFYPSG TRLVALESGK DRPSCSSSPL
      181 PSPCSPLLAK PEQQYSTHPL LPFNNYQKQD VTKLTAGDLR YQADVPGPQN LVYLPTIGSN
      241 LINEHHPPII EKCPVSSKSQ TPLLSNKYLT LCPQDLNLMQ ELVRANEPLK APIDLQFNDE
      301 LTLMDVVKIS EAALKRIVCM ARDLAAFQAL DIEDKKNIMK GSCSELLILR GVMAFDPNEN
      361 TWKHNFSKGF KEMEVKLDVL KSCKESQHYE EHKRFLTEFN QQIQTNECVM LLLMAIVIFR
      421 PDRPNLRDTQ RIRDAQNMYY GVLRRVLECE YPHGGAAQVY ETLVRKLEEL KHLKEGLVRI
      481 YYGFDSRQLD PLIKELFDMM
//