LOCUS WKY06153.1 288 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-2978
PROTEIN_ID WKY06153.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006395"
/note="NIPPO_CHRIV.G10235.T1"
intron_pos 33:0 (1/6)
intron_pos 78:0 (2/6)
intron_pos 107:0 (3/6)
intron_pos 149:0 (4/6)
intron_pos 196:0 (5/6)
intron_pos 241:0 (6/6)
BEGIN
1 MCKRLLKDDL LFEFGVQIKT IKSDRLERGV EQGVTSGEET GRGARLIRGQ QQPRAEAGWG
61 RGTFVCCSVT DLRYQISTNR DVNTATAMKE YKLVVCGCGG VGKSALTVQF VQGFFVQSYD
121 ATIEDSYRKH LVLDGEDCRL EILDTAGTEQ FSGMRDLYVR NGQGFILVYS VNDRESLEEI
181 RDIRETIVRI KQDRNVPMVL VGNKTDLMRV VQTSTGRELS KQFNCSFFET SAKLNENVGM
241 VFTDCVRQIR NSLSPPKIKR TLRLRKKTSP RDVPESEKFK RKSCCLIM
//