LOCUS       WKY06114.1               757 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2940
PROTEIN_ID  WKY06114.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006373"
                     /note="NIPPO_CHRIV.G10213.T2"
     intron_pos      41:2 (1/18)
     intron_pos      102:0 (2/18)
     intron_pos      155:0 (3/18)
     intron_pos      183:0 (4/18)
     intron_pos      209:0 (5/18)
     intron_pos      256:2 (6/18)
     intron_pos      285:2 (7/18)
     intron_pos      305:0 (8/18)
     intron_pos      317:1 (9/18)
     intron_pos      378:1 (10/18)
     intron_pos      411:0 (11/18)
     intron_pos      446:0 (12/18)
     intron_pos      496:0 (13/18)
     intron_pos      539:1 (14/18)
     intron_pos      571:2 (15/18)
     intron_pos      618:0 (16/18)
     intron_pos      666:0 (17/18)
     intron_pos      707:0 (18/18)
BEGIN
        1 MNRMRSRAKD QDPTLSPSSP LPSASSSNLN LSPMTSPSRD SLPCKLIYVH LPFDQHSRLE
       61 VRAGQTARDA ISKLLKKRNI TPQLCHVNVS EDPRSEQIDL MEDLESIASR LEKNELWVHS
      121 EYLDTVSSIK HTIVRRTFIP PVNCDVCKNP IWLVGYRCEF CQFKFHQRCS SFAPLYCDLI
      181 QTINHFLSSF LSAPLYCDLI QTVPRDEVLA QRLLLLASRM EGQDAEIAES VLNQLQPNPS
      241 PAHTPEGSHA DLTLKRGGGV KRHQPPPNPA TREAPGPLAP YPRDRSSSAP NINAINDEVV
      301 LEHNQRILDA LEIQHQVESD ANSKTFMRTS KSRQQFQSGP FVAPNAASGA GGLAVRRPPN
      361 RLHPRPDTSP FGSNSPSSTC SSPPANQLHA GQLLPPTLPL TPPQSAPPQK FSPGFFRGRS
      421 RSPGERLEPQ RTRALANKLA HEDWEIDEKQ ITLQCKVGSG SFGTVYRGEY FGLVAVKKLN
      481 VGEPTLQQLQ AFKNEVAVLK KTRHLNVLLF MGWVREPSLA IVTQWCEGSS LYKHIHVVEP
      541 RVEFEMSAIL DIFKQITLGM NYLHSKNIIH RDLKTNNIFL MDDMSTVKIG DFGLATVKTR
      601 WSGGQQSQQP TGSILWMAPE VIRMQDSNPY TTLSDVYSFG IVMYEVLSSS LPYSNINNRD
      661 QILFMVGRGY LRPDMSKMRS DTPKPLMSLY ERCIKFNRSD RPEFSEVLDK LRGVSLPKLT
      721 RSTSAPSLYR GVLETSEPIG GYNSGAPRAS HHLWGYL
//