LOCUS WKY06077.1 291 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-2902
PROTEIN_ID WKY06077.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006349"
/note="NIPPO_CHRIV.G10189.T2"
intron_pos 47:0 (1/6)
intron_pos 98:1 (2/6)
intron_pos 138:1 (3/6)
intron_pos 150:1 (4/6)
intron_pos 209:0 (5/6)
intron_pos 268:0 (6/6)
BEGIN
1 MMLRHLLCAV LATLSVVVTL VLATSLVVNH ITSIEEEMSH ELMEIKAQTD HLWMEIVELK
61 EFSPLTNKIR RQIEYSLGST SGDANTSTLQ PPLVSTCACT AQHSCQPGPP GAAGEEGPDG
121 RDGIDGADGY DGFDAHPSER GPQGPDGAKG KRGLRGSQGR PGHPGKDGQR GYPGDMGPPG
181 PPGPDGEPGR PGPNGLDGVS YKTRQGTKGL LGQAGREGPP GLRGKSGGVG QPGVPGYLGT
241 SGSTGMDGTI GAVGPVGPPG KPGENREFCG CFPREEAVSE LESSGSFPVY G
//