LOCUS       WKY06070.1               822 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2896
PROTEIN_ID  WKY06070.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006345"
                     /note="NIPPO_CHRIV.G10185.T1"
     intron_pos      40:2 (1/14)
     intron_pos      84:2 (2/14)
     intron_pos      118:2 (3/14)
     intron_pos      168:0 (4/14)
     intron_pos      213:0 (5/14)
     intron_pos      265:0 (6/14)
     intron_pos      426:0 (7/14)
     intron_pos      478:1 (8/14)
     intron_pos      579:2 (9/14)
     intron_pos      612:0 (10/14)
     intron_pos      645:2 (11/14)
     intron_pos      696:0 (12/14)
     intron_pos      715:0 (13/14)
     intron_pos      763:0 (14/14)
BEGIN
        1 MASNGLQPLI VDRSSTSSAS EEVSGELTSA DYAMACESHS RSSFAMLVND SNSDVSIDSD
       61 GRPPPDPENS LAATKKVPPT VIDRLHLDLV QLPNTLPNGC FASVSYAAEM ERFAQKHNAD
      121 AFVDPFEEED RRSRTEMWVE STSAACPSDD EKRSLPKEES DDDTIPQVRV FECSEKSVSA
      181 SPPGNTTTST TGGDDEPSHS VQIQINDELL PSGHQQTMNR LDSLATSEMS ETQSVVSSDI
      241 DKISLLKLRF KSNLQKARED AKKEVDLEKF DRFWLYCYNK GEEAKKERDE HAAEAREVNR
      301 RRGRTPTIER VVLYYTTDRR LSLTPSQPSL SPSPDLYSQR SQLENSARQL FIQPKKPPVV
      361 QQDSVTSEPI GDIPPIIPTT ANQLPGATSS LSYQTHPCGH IVIYESEEKQ PCSDRRSEEA
      421 TDLSLEQFSS LIPAEINIDT EVESIDEKSE YLLFRLAGTS ESDTEEGRVE VSSKAVEQQS
      481 ATTSTNQLMR IPHVPTSDPV ISNQRRSEAP SSYKSEVQTE TAATARENRE ENNQQSPTKD
      541 MQGETIPTTD SPSISPLPPI MVLADAPETD VALPDFKEAL SENEMSSLED LLAFETRPSS
      601 SHRKSVSFND VIDASMNEMP RKTPSPELYS NVKPILKKDS KQRESMRRLL DYTVERLYKD
      661 LRMLVEERDR SVHALELTPE DKVEDLSPQS NIFQQKYREK LLENKLTLDK RIDQVWMKLR
      721 ELAVDGPAAE FVFGVRHSSE LTLNIRRQLS GWNGFARRES IPINTKNSLH DMELASDFSR
      781 RLSRVREQLR RNDLDPFEDD RTMEDMLMVV SRIIGKREKF TS
//