LOCUS       WKY06066.1              1267 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2890
PROTEIN_ID  WKY06066.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006341"
                     /note="NIPPO_CHRIV.G10181.T2"
     intron_pos      35:0 (1/31)
     intron_pos      64:0 (2/31)
     intron_pos      123:0 (3/31)
     intron_pos      172:1 (4/31)
     intron_pos      231:0 (5/31)
     intron_pos      283:0 (6/31)
     intron_pos      308:1 (7/31)
     intron_pos      353:1 (8/31)
     intron_pos      405:1 (9/31)
     intron_pos      439:0 (10/31)
     intron_pos      474:0 (11/31)
     intron_pos      518:1 (12/31)
     intron_pos      549:2 (13/31)
     intron_pos      602:0 (14/31)
     intron_pos      641:2 (15/31)
     intron_pos      699:0 (16/31)
     intron_pos      729:0 (17/31)
     intron_pos      761:2 (18/31)
     intron_pos      787:2 (19/31)
     intron_pos      834:2 (20/31)
     intron_pos      860:0 (21/31)
     intron_pos      886:0 (22/31)
     intron_pos      929:0 (23/31)
     intron_pos      964:2 (24/31)
     intron_pos      995:1 (25/31)
     intron_pos      1047:0 (26/31)
     intron_pos      1086:0 (27/31)
     intron_pos      1122:0 (28/31)
     intron_pos      1163:0 (29/31)
     intron_pos      1207:1 (30/31)
     intron_pos      1247:0 (31/31)
BEGIN
        1 MKKGPHVTTS EKNGVDTAAF AAGVTAPDTI GGTQVSDPSK DFGCTLAQLR SLMEARGAEA
       61 IVRLSTEHDG VDGLCEKLKV DPVRGLANNP TDLERRRGAF GANTIPPVKS KSFTRLLIDA
      121 CRDPTLIILV VSGFVNLALS FYEPEMQSPI DEETVTAAAF AAGGFLSNST LGFDLLNSTL
      181 ALNVTTPKPS GEGHGTAWIE GVAILLCVIV VVLVTAGNDY SKERQFRNLQ EKIETGQKFS
      241 VIRDGEAIDV PVSDLVVGDI ARVKYGDLLP ADGFLLQGND LKIDESSLTG ESDHIKKTVE
      301 SDPVLLSGTY AMEGSGKMVL TAVGVNSQTG IIMMLLGSGK PGVGGAEDDS TSTSSSSSSS
      361 SSSSSSNSSS SSNSSKSSDD DDGLSAKSVL QSKLSKLALQ IIYCGTTVAA VALVVLITRF
      421 CIEHYVRDGI PFSIADIQMF VKFFIIAVTI LVISIPEGLP LAIALALTYS VKKMMFDNNL
      481 VRHLDACETM GNATTICSDK TGTLTTNRMT VVDSYINGNH CEGQDNQPHG SALPGNTTHL
      541 ICEAISVNSA YNSMIVEPAK AGEQVQQLGN KTECGLLGFV QKLGGDYSVI RKNFPEESLV
      601 KVYTFNSSRK CMMTVINLFE NGVNVGYRVY CKGASEIILA RCAYLIGSDG RPHVFSNERL
      661 KEITATVISQ MANNGLRTIC IAYKDYIRKD IREADRTEIP FENDTDIDWN DEQEISKNFV
      721 GIAICGIQDP VRPEVPAAIE KCKRAGITVR MVTGDNINTA RAIAMSCKIL EPGEDFLAME
      781 GREFNERIRG PDGKVSQTKL DEIWPRLRVL ARAQPADKYT LVKGIIDSKS TPQREIVAVT
      841 GDGTNDGPAL KKADVGFAMG IAGTDVAKEA SDIILTDDNF TSIVKAVMWG RNVYDSISKF
      901 LQFQLTVNVV AVITAFVGAV TVSDSPLKAV HMLWINLIMD TLASLALATE VPTDELLNRK
      961 PYGRKKSLIS RTMVKNILCH ALYQLVILFT IFYYGDRIFG IRSGLYAPLF APPSQHFTIV
     1021 FNAFVMMTLF NEINARKVHG ERNVFKGLAN NRVFCVIWIS TFISQILITQ FGGAWFSTAP
     1081 LTGKQWIACL ALGLSTLFWG QVVATIPSKK LPKNWKVGRG EVEPSKIHIN GDYNVRARSR
     1141 ALTLRRSGKS LWIRGMFLMG QHLRIIRAFK MRDKNFGKTA PTMTAEAAER WRSSYRKYRH
     1201 QKHHEKKAAA ERAEAERSKL PADIKEKRKT FKQIKAVARG RSLEKHEHHS KNKHQHSVDI
     1261 EGDSGHS
//