LOCUS       WKY05991.1               885 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2815
PROTEIN_ID  WKY05991.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006301"
                     /note="NIPPO_CHRIV.G10141.T4"
     intron_pos      50:2 (1/21)
     intron_pos      85:1 (2/21)
     intron_pos      148:0 (3/21)
     intron_pos      169:1 (4/21)
     intron_pos      219:0 (5/21)
     intron_pos      253:2 (6/21)
     intron_pos      289:2 (7/21)
     intron_pos      323:0 (8/21)
     intron_pos      381:0 (9/21)
     intron_pos      436:0 (10/21)
     intron_pos      472:0 (11/21)
     intron_pos      509:0 (12/21)
     intron_pos      541:0 (13/21)
     intron_pos      591:2 (14/21)
     intron_pos      617:2 (15/21)
     intron_pos      652:1 (16/21)
     intron_pos      703:0 (17/21)
     intron_pos      738:2 (18/21)
     intron_pos      761:0 (19/21)
     intron_pos      788:2 (20/21)
     intron_pos      835:2 (21/21)
BEGIN
        1 MTRIDDRSTD ENSTMDAVVA KRTNGRVTVK ELNRLISDVQ EYPLEPDSNW YVVSNTWWTK
       61 VLEAARQGFV DDIPSIDNSS ISCKSGDAYF LRSNLAESID FHLLPEPVFN RLRDVYGLDL
      121 ADRDYICRKV VSKNGKHVVE VYPRVVMVYL ARDNSRFCEL RLTGSDTLLD LRDRALKSLG
      181 LSSVPSEKLR FYIAHGDKYE LIDISQQNID SYFDTAQKVY IDVCNSDDRW FINNEKRSNS
      241 RADYASNSMS SYSLSWLSLL FHTFRYLSNW RWLYEFIAYI LRLHLAPVRF YESSRDRIGN
      301 YVKGACGLQN LGNTCFMASA LQCLSNVPEL TGYFLSNRYV ADINERNPLG TRGELARAYG
      361 DLLHNMWSGE NTSIVPRKVK MTIGQFAPRF SGYAQQDSQE LLAYVLDGLH EDLNRIKIKP
      421 YVPDDETLER LEEHEQAEKS WQAYKARNDS IIVDLVHGQL KSTLVCPVCA KVSIKFDPFC
      481 FLSVPLPPKE KVRQVVTLIF NTKRRWAKFT ITMATSTTVQ DAINTMKNSL QNIGNDFTGE
      541 IVIYSIGLGE ISDEVRLLDP AEPIYIEDKN QFLYACQVDH NPNTHKIIVV KNQTQTGRTL
      601 SLPMVFTLPS SDYLTRSFLA NRVLPFISDT FMKSPLEVCF SDNDSKSTED REQYNLFVTH
      661 GVNASPFPKA QDEPVSWPGG LLVQTVVFQW KDPQIFNQYK GADLIDREVS VSSRKDIHLM
      721 ECIDLFTKQE QLGEEDSWYC PKCKKHERAT KKLDLWNLPQ ILIIHLKRFQ YSKWHRDKID
      781 IPVVIPVKGF ELNSKLANER HEHVKYDLIA ISHHVGGLGG GHYTASALNT TTGKWYEFND
      841 SCVSETAAPS DPIVGRTPYM LVYRRQEVTT DGIMPDANVE EEMEE
//