LOCUS WKY05893.1 268 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-2718
PROTEIN_ID WKY05893.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_006252"
/note="NIPPO_CHRIV.G10092.T1"
intron_pos 66:1 (1/3)
intron_pos 125:0 (2/3)
intron_pos 161:1 (3/3)
BEGIN
1 MASESLRVEQ VDANILDVEY RQLMERQLEL IITELPVTAS RICERLKPEI QLLIDGILWT
61 SRAYRGASPG QIEMAIAYKG YTRGKVLLHF FLSVFLSYIT KRVASILGHT SAQRILLKTA
121 ALMEVGHILH YLNFLRVGGY STLSESCLSL RNWNGKEQTI GTINYESQNR ELLWHTFRDA
181 LLLLWPAVAA VSAKWKTHSG GGAMPEGGVA LACGRCGRVA VVPMRAQGCG HIACYWCVTS
241 RTPTESARCA TCGQETAHIT PLGRSALM
//