LOCUS       WKY05857.1              1338 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2681
PROTEIN_ID  WKY05857.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006234"
                     /note="NIPPO_CHRIV.G10074.T1"
     intron_pos      28:0 (1/33)
     intron_pos      74:0 (2/33)
     intron_pos      120:1 (3/33)
     intron_pos      181:0 (4/33)
     intron_pos      243:0 (5/33)
     intron_pos      284:2 (6/33)
     intron_pos      321:0 (7/33)
     intron_pos      350:0 (8/33)
     intron_pos      401:0 (9/33)
     intron_pos      429:0 (10/33)
     intron_pos      459:0 (11/33)
     intron_pos      494:2 (12/33)
     intron_pos      528:0 (13/33)
     intron_pos      584:0 (14/33)
     intron_pos      616:2 (15/33)
     intron_pos      663:0 (16/33)
     intron_pos      694:2 (17/33)
     intron_pos      740:0 (18/33)
     intron_pos      781:1 (19/33)
     intron_pos      799:2 (20/33)
     intron_pos      829:1 (21/33)
     intron_pos      871:0 (22/33)
     intron_pos      903:2 (23/33)
     intron_pos      925:0 (24/33)
     intron_pos      956:1 (25/33)
     intron_pos      1014:1 (26/33)
     intron_pos      1035:1 (27/33)
     intron_pos      1070:0 (28/33)
     intron_pos      1134:1 (29/33)
     intron_pos      1170:0 (30/33)
     intron_pos      1205:0 (31/33)
     intron_pos      1254:2 (32/33)
     intron_pos      1284:2 (33/33)
BEGIN
        1 MAGKQGAKPP TPKPKGALSR QGSKTKKEGI SWNMLVLISA VLAVISYFTY TEFFDGPHLR
       61 KLQPPIKGLE INRKTWGSYR PHTYFGLRTR DPRSPLFGIM WYEQPNIVQR PHIRHWCDQG
      121 DGLKSYGWYA ADARTFGRQN ITDRSANLNT DWISDGEAWS ARVTVEPKRR YTVVLYLVAQ
      181 DSQCKFRIGN HLRDPISGKT ILFGDIKLTI DVTNEKELLH SALVWDDEVR LDNLNDLILM
      241 NTRALESENG LIYQLGQQKP FHEGRFIAVQ FNIMTKTTFE IAFSTRRSQP KTGPRFTQEL
      301 LKREREFNTR FGEAFNLERK NYNDVELTMA KVALSNMLGG IGYWHGYNKV HAGGGATTPY
      361 GPHELFSAVP SRSFFPRGFL WDEGFHNILI RKFDADLSLQ ILVSWLNTMS EDGWIPREMI
      421 LGEEAEAKVP SEFVVQRIDV ANPPSIFYVV DQMLSDDRFI DKHGKVMAGV YQRLELWYRW
      481 LLKSQAGKKK GTFRWRGRNS TTTLELNPKT LASGLDDYPR ASNPSQEEYH LDLRCWLALG
      541 SRVMDRLAQR FEEGKNKNKY SAHATALNDF EDLVRLHWSD SKKSFFDFGL HSDKVHLVRK
      601 KIKQTQPGPE QYVFERLTVN QPKLGFVEDV FGYNSLFPLL LRLLPPESDA LSQTLSKLTD
      661 AELLWTDFGL RSIARASPYY ASRNTEHDPP YWRGYIWVNV NYMALSALKH YGSVPGPSQA
      721 VARDVFTKLK ANLVTNIAKE FNRTGYIWEN YDDKTGRGRG SHPFNGWSSL VLMIMSDETS
      781 AERIPTDMSS YDVIGSDDDE PLITSPRSVS STLSPANLSR VRQPYMFTGG LGLSREGSLV
      841 SLHSEDDFRE HNMALRYRLY SRLDPGGQQL RMPDHVIPSE YFSILPFEDM KDRSGKQSSI
      901 VTIFSLWNTM MGTSLLAMPW ALQQAGLFWG LFLMLSLALI CYYTAYLVLD SPRNIPGIMD
      961 PVMMEFSDVC RHFFGRVGEY LAVGFSVVVL LGGIMVYWVL MSNFLYYTGA VVYESLQPNS
     1021 STIPIMENKT FTCDVYCPLE QSAPLMGNKE LLDYLAEPTW DFDRLWQLQG TVPLYLAILT
     1081 FPLMNFKSPT FFTKFNVLGT LSVMYLLVFT GSKLLECGLN MDFSDKDSIH YAAPFNWHFP
     1141 ALTGTMTLSY FIHNAVLTIL RNQKNPENNA RDLSIGYALA AISYVFIGFT FYAGFPVQRS
     1201 CISDNFLNNF GAGDILSSTA RLFLLFQMIT VLPLLMFLIR SQLFYAFLGK TWPGIGSVIL
     1261 LNCGIIAIAV SVAILYPKVG SILRYVGSLS GLIYVFALPC IVYMKKLHTE GRLTTSKRII
     1321 HTTIVALGVL NFIAQFFL
//