LOCUS       WKY05789.1              1263 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2614
PROTEIN_ID  WKY05789.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006193"
                     /note="NIPPO_CHRIV.G10033.T1"
     intron_pos      16:0 (1/32)
     intron_pos      39:2 (2/32)
     intron_pos      70:0 (3/32)
     intron_pos      96:0 (4/32)
     intron_pos      130:0 (5/32)
     intron_pos      151:0 (6/32)
     intron_pos      190:2 (7/32)
     intron_pos      231:0 (8/32)
     intron_pos      266:0 (9/32)
     intron_pos      301:0 (10/32)
     intron_pos      337:1 (11/32)
     intron_pos      369:0 (12/32)
     intron_pos      436:2 (13/32)
     intron_pos      473:2 (14/32)
     intron_pos      505:2 (15/32)
     intron_pos      563:0 (16/32)
     intron_pos      602:2 (17/32)
     intron_pos      643:0 (18/32)
     intron_pos      696:0 (19/32)
     intron_pos      725:2 (20/32)
     intron_pos      762:0 (21/32)
     intron_pos      802:0 (22/32)
     intron_pos      834:0 (23/32)
     intron_pos      875:0 (24/32)
     intron_pos      931:1 (25/32)
     intron_pos      977:1 (26/32)
     intron_pos      1002:0 (27/32)
     intron_pos      1045:1 (28/32)
     intron_pos      1077:0 (29/32)
     intron_pos      1115:0 (30/32)
     intron_pos      1158:2 (31/32)
     intron_pos      1208:0 (32/32)
BEGIN
        1 MVEAVSLKDA LGNVELLEDL ILPDDQPSIE ARPLPLLCRT NFDTNFEDRN AYVTGVSKYI
       61 EEATRHALFN DLLAEGLQHA ANLYTWRCCS RAAPTVKSND QPNRVEINMK VVEVLKPEVD
      121 KLQRFMLFTN DAISRFCEEV RRLCHIEKRK DFVSEAYLLT LGRFLNMFAV LDELKNMKAS
      181 IKNDFSAFRR SAQFLQVMSD TQTIHDMQNL SMFLATQNKI KDDIRAKMIK IEAYEELLAD
      241 VINICAHMFE SHLYLTPSER HMFVKVIAFS LFLMDGDVGN VAKMDQKKRL NLSRLDKIFK
      301 SLEVVPLYGD MQIQPFSFVK RSKFYDASKW PLSDKEGEKC HVNIVEKVRV TRADHESYVT
      361 QLAKLNNSVA ISDRVSLSSD AENRELTSLA LSGVQLLCQW TADVVETISW KLLHPTNSRD
      421 NKDCPETAEE YERATRYNYS AAEKAALIQT IAMIKGLQSL LGRIESSLSN AIRRHIYTEL
      481 QAFVQHAFNE PIQKAVKGKK DLLASILQSV RDTCVDAFST GSESRPSIEK LKKRQGKDSA
      541 NSSSSDLRVA RRTSPPSPSS TQLYMARTQL ESLISERASG GKRVLRKELD NKTIERISVF
      601 LRKSTHWPAL FRLSDSLAEA AELSQLWFRE FYLEMTMGQR IQFPIEMSIP WILTDHILTN
      661 ADPSLVEGAL YQLDLYNDAA NYSLFNFRKR FLFDEVEAEV NLCFDQFIYK LSDMVFTHYK
      721 QLASCMMLDK RFKLDCQRAG VTIRTPPAGR FDSVLKQRHV QLLGRSIDLN RLISQRISIA
      781 LLKALDTAIW MFESAELSSI VELDFLIETN RLCHSLLRER LFSIPDFSDL LLEANHNVSA
      841 PHGRITLHVF WELNYDFIPN FVYNGSTHRF VRAKEVFRKT PAREKKPQVS FIYLWGSKSL
      901 NAAFANIFFS YSRFIGIPHL KAIARLLQYQ GIAVILEELL KMARILISEK LKRHLRSIYT
      961 VMPKLCKLPR SDYGSPGVLQ YYFHHLEGVG KYNELKGEFC QDLREIGNIV LFCQQLESGM
     1021 AQEEVQDLLA AAAFTNVIPK PPAKNVAEQE KQLAKLEEKY SRIQLTNVVE KFGDDKQIAI
     1081 SREAELMTKE RLCCGLNIFE MFLRRIRQML GDDPIFTGGY PANGVMWVDE CVEFHRVWSA
     1141 LQFFICQPRV SDEDRLVEEL FGDSLQWGGI TIICLLNQQR RFEVLDFSYH LHRIQRFDGK
     1201 DETVNGVRLS RMVDRIRRFQ LLNSQILVIL SNYLTSNEEF EEEHVREFMP PTHPSLNGHF
     1261 PES
//