LOCUS       WKY05762.1               754 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2587
PROTEIN_ID  WKY05762.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006175"
                     /note="NIPPO_CHRIV.G10015.T3"
     intron_pos      20:1 (1/18)
     intron_pos      75:1 (2/18)
     intron_pos      116:0 (3/18)
     intron_pos      162:2 (4/18)
     intron_pos      207:0 (5/18)
     intron_pos      257:2 (6/18)
     intron_pos      294:2 (7/18)
     intron_pos      339:2 (8/18)
     intron_pos      367:1 (9/18)
     intron_pos      459:2 (10/18)
     intron_pos      485:1 (11/18)
     intron_pos      531:1 (12/18)
     intron_pos      582:1 (13/18)
     intron_pos      625:2 (14/18)
     intron_pos      648:0 (15/18)
     intron_pos      660:0 (16/18)
     intron_pos      681:0 (17/18)
     intron_pos      724:0 (18/18)
BEGIN
        1 MDPLNVRPLR KSRSLRHVGG QLLREVREIL GNESHENQSE QNSTTITEGS LRSQSGPLQR
       61 EAPAGDRRCS RPILDNRQKM LYSSCFKLYF GVSDEMGDFL EDFCNVVAPS AERYPIADRM
      121 KKQTRDAQER FGLQKFYHCF SCDNLLTSSK ALCRTEGCPM QRVAPKPSKN SKRTTIYTLQ
      181 IQPQLALILQ RVLPLLIELH GSIHFREESN ENPVLSDTSS FPKYKQDIEL RSDFENKKIS
      241 IVLSLNFDGV KFKKLSRFLL HKDLTDKLRK EVEMFENEHL DRLYAKMSQA GDIRGLNVTS
      301 NVQLSDDWYV PAKAILPYED LSDEHRVWMA THSSTKRFRV VHSTMKRFRR EQKSLLGTVS
      361 SEESSSESDI VNRIGASRDT ALTKGSAETR GSREITKGSR ETRGSRELTK SSAETRGSRE
      421 FTKASAETRG SREFTKASAE TKGTREVTKG SAETKDGKDE VDEVSVKGPK KSDGSEFRKG
      481 PGGWTQSFIY LLTVWICGAL FSALIMYILL LQLQDKPHYF GKGSHIGGIP SVVYEPNPNR
      541 FDVSTKGVIS FSSREPKSYL NYMVRYKKLL KGEMHHVSLY LQEYNKTESP NCTVVGGAPD
      601 GAPTNQSCRM EADSSEIFGE CALTIENINK GMGFGEGEPC IMLRLTRMLG WYPEDAESQG
      661 EPCSEGEHCC GTMSFSCESK QGSAVTRMLP ASGMSTCAYP FWNQPGYEQP FVMMKVSNLM
      721 TDMNEIRCKP EQASIQHFDD GEENVARIFI EKLD
//