LOCUS       WKY05564.1               588 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2389
PROTEIN_ID  WKY05564.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006066"
                     /note="NIPPO_CHRIV.G9906.T2"
     intron_pos      80:0 (1/13)
     intron_pos      117:2 (2/13)
     intron_pos      144:2 (3/13)
     intron_pos      180:0 (4/13)
     intron_pos      221:0 (5/13)
     intron_pos      251:0 (6/13)
     intron_pos      290:0 (7/13)
     intron_pos      300:2 (8/13)
     intron_pos      365:2 (9/13)
     intron_pos      430:1 (10/13)
     intron_pos      470:0 (11/13)
     intron_pos      528:1 (12/13)
     intron_pos      551:0 (13/13)
BEGIN
        1 MTRTPPPLDR GGRKAGPMAF ALCAEMRCPL VALELACVFP LVLLLSPQRQ DYHPLLDAPL
       61 NLPGVRVRLF PSGVSYLSQV ASNVLAEQLP RIFIPDVEHR LPGDQGAIFI SRIKISRFRR
      121 AEIHDVTTSA PNRISWIMKN LDLGFIGDLS GAVDIVVPFN LTGQAEVQAE GLSVQLESAI
      181 ERGINGSAHI VTISCHSTIR AVDVTNHNGG LFGLAVTVFK QGVSDNVRFL LQGLICKKIR
      241 KYLDEDLNEK LAEVQTRSPL ADAIETNAIK STRLSETVGG VTLGSLIGKS ISKEFFIDFR
      301 LREDPRCGTN MVDIACAGEI SFRGEGGTPF GAPPFTWTRA QSDTHMLMVQ VSDYLPNSLF
      361 YHAHRQRLIR LHLTPATPGV AGFLRTSCEN SFCVADLLPQ ISEIYPNHTL ELSLASTRAP
      421 AVLFSEKKGG VVSVNLGGIV IVFVLDGNRR KQLTMLDVEV VADAKLNLQD RIVSGSVELT
      481 KFELSSRSGV VKITRDELSD ISILVSQMIQ NMINEMLANG FPLPLPHVLR LQNVALEVLT
      541 RRVLVRTDVA VDEKRLSRLA ARTLFNGPTF SAPIETIAIR NFAHSTFP
//