LOCUS       WKY05563.1               487 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2388
PROTEIN_ID  WKY05563.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006065"
                     /note="NIPPO_CHRIV.G9905.T2"
     intron_pos      49:0 (1/13)
     intron_pos      91:2 (2/13)
     intron_pos      120:0 (3/13)
     intron_pos      159:0 (4/13)
     intron_pos      192:2 (5/13)
     intron_pos      218:2 (6/13)
     intron_pos      241:0 (7/13)
     intron_pos      284:0 (8/13)
     intron_pos      307:2 (9/13)
     intron_pos      336:2 (10/13)
     intron_pos      376:2 (11/13)
     intron_pos      407:1 (12/13)
     intron_pos      448:1 (13/13)
BEGIN
        1 MLLLFLLLFI LPYGSHASEL GATFGDAAVS QLVRHAAAKM LQEPKIAEIT LKTQESPSLG
       61 SLAHLEILNQ VAYKNLSVVF HDRSLHVVVD RLSLLSHSNL SEVLWPFGLG EQAVDIDLQL
      121 HRAEIRLDAD ETTFSLGECL LIGSELAASV PGHWIADRGA SAVAALLSPV FDSVLCNALQ
      181 HHIGSLEANT VMRFPVYDLI PEKLRTYIAN NDSTLYYRLK SVKVDDHRLT ARAQLEWVEI
      241 TETPPVSLLD ETANITLLEM ELNADDVVTV WLEDGIINEL LGQVDWNFEW MNEQLPVTSP
      301 VIPPDSREFL TTLCTECYFQ VNVGARGRPS LTATNSRDRV HLRVVNPDRN LTSVFVSFVL
      361 TIEAEIRPSF DGGILRTLVQ LLDTDIKMEV GAFPKSWGIF MQDLMRGMIM DMLWPEIKNA
      421 IEELSYGKGV QISRACGVDP NEIRLDIGEG NFALTSRLAL QHLDIERCIK DLKTSLPTTS
      481 KIFNKID
//