LOCUS       WKY05542.1               546 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2367
PROTEIN_ID  WKY05542.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006056"
                     /note="NIPPO_CHRIV.G9896.T1"
     intron_pos      14:2 (1/16)
     intron_pos      27:2 (2/16)
     intron_pos      46:1 (3/16)
     intron_pos      109:0 (4/16)
     intron_pos      133:2 (5/16)
     intron_pos      188:1 (6/16)
     intron_pos      270:2 (7/16)
     intron_pos      298:2 (8/16)
     intron_pos      331:2 (9/16)
     intron_pos      391:0 (10/16)
     intron_pos      435:1 (11/16)
     intron_pos      459:0 (12/16)
     intron_pos      497:0 (13/16)
     intron_pos      520:1 (14/16)
     intron_pos      524:0 (15/16)
     intron_pos      543:2 (16/16)
BEGIN
        1 MTQWNEMRFR GFSLILSHCG APLLLLRMST CYQSSMSTAV THKYSDGERK KRRPPNTGSK
       61 LLERQENEML FSIIGSENVS LSAAVVELLF VEHRQWKLTF RGVISLVKDY QNRAYFLRLY
      121 DILSGRKLWD FRLYKGFQAV GYDNCPCLLT FEDESHQNVY GLNFACVDET RDFKGHLDKR
      181 HEQEGKSTVA RSSTGPTVNT PFALSSTGIG LSTAPTPITS GVTPVGTMVH AEKISSVGSA
      241 TSFFSRGKDK KKKQKPRIRK EDISNPTNFQ HKAHVGWDQD NGFSNNMCDS EPMDESIKNI
      301 IRAAGQDPTN MSKKTIKFVF DFIENYKDDT SAATTVQPFK SPAPVAPQWS SPAPPPPPSR
      361 TASFQPPARP PPPPPTVSSS ARPIARALPQ VPHGDVGRPI GVPPPPPPPP PSSGSTAAPP
      421 PPPPPPPPPP SVISSTAPAA PPPPPSFSSD SGRGNLLAEI QAGKQLRSAT VIAKPAPADP
      481 RGDVMAQIRQ GASLRHVDTA TEQEKRRSET TVSDMGGIAA KKMNLMTKME NGQIRGLETT
      541 MNGPRH
//