LOCUS       WKY05517.1               785 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2343
PROTEIN_ID  WKY05517.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006043"
                     /note="NIPPO_CHRIV.G9883.T1"
     intron_pos      63:0 (1/18)
     intron_pos      138:0 (2/18)
     intron_pos      175:0 (3/18)
     intron_pos      222:1 (4/18)
     intron_pos      285:1 (5/18)
     intron_pos      310:1 (6/18)
     intron_pos      365:0 (7/18)
     intron_pos      422:1 (8/18)
     intron_pos      444:0 (9/18)
     intron_pos      464:2 (10/18)
     intron_pos      503:1 (11/18)
     intron_pos      532:0 (12/18)
     intron_pos      565:1 (13/18)
     intron_pos      594:2 (14/18)
     intron_pos      623:0 (15/18)
     intron_pos      650:0 (16/18)
     intron_pos      694:2 (17/18)
     intron_pos      741:2 (18/18)
BEGIN
        1 MLLQHVNAFI LIFIAVMQPV LLQESVQIEP CPTMGTSAYI LVTISSALDY EGFIGLLTFY
       61 SRVMPIDETI KYKFNFGINT SVSIETKSLW NEMETWIEDS AQMQKFWESS KTTSSAFQQS
      121 DDPQAPLSSV IKSFSDIIAN DNQQSSTVVQ KKQVVLLTDY IPLNVTDAMN RITKVNVQKL
      181 GVYHEMNLTD VAKLVSFPVY SAADDILLNR VRQDFQRPLD FEFPTTVYQG KPVERVSLFM
      241 MEFDAGTIHQ TLSNSADGDL CSVPSNKMLD QLLKVRFAHN DTIRELSLPF LGDNTEAFAQ
      301 RCIARVSQTI GGSSGDQCDQ TVQKLLEVFV SNAQETNEFT SLLVTNTECA ASKVANYSGA
      361 VSGKAWVRLI LSQDLSEAYT DLIAPLADQG FLNSTVNRQV VLNTAFYLQN YSTSCTSEMP
      421 LVPLVSARPY HRPKHLYIAL DDMRQHKKQM EILTEMMLQP RAYKTAKECP KVARLPWEIK
      481 SDHVHIDREF LLGEGTISNV YLGKLKGKAP ILQWIGRVEM KQYQDCPVAV RVPRHFDEPE
      541 EDQLFREITS MRRLRHHDHI ALFLGWTNKN DLVCSLLELT HMNLLKYLGQ INETVSDGDA
      601 TSTAYIPYQM LFKIIWEICD GISYIHSRNL IHRDLAARNV LLTTGLRAKI SGFGFCSDPD
      661 DPKFSGNSLA VRYLPVRWLA PECFQGKFSQ KSDTWSFGVL LYETFTLGEV PYDDLQKPEE
      721 IVECVLHSRI PAHPKYASRQ TYNIMQRCFH RFPERRPLFN QLKDIFHSEM ETLFVNPSFE
      781 GDDEQ
//