LOCUS       WKY05486.1               308 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2311
PROTEIN_ID  WKY05486.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006028"
                     /note="NIPPO_CHRIV.G9868.T2"
     intron_pos      28:1 (1/9)
     intron_pos      60:0 (2/9)
     intron_pos      105:1 (3/9)
     intron_pos      149:2 (4/9)
     intron_pos      185:1 (5/9)
     intron_pos      219:1 (6/9)
     intron_pos      250:2 (7/9)
     intron_pos      295:1 (8/9)
     intron_pos      308:0 (9/9)
BEGIN
        1 MSSTAPNHGV AAPHQKNLAR VQATAPPVVT CSPSSLSTQS VAPQIATIGA TEHTDSSAEV
       61 LSVFECPVCL EYMLPPYLQC QAGHLVCGNC RPKLQCCPTC RGPTPSVRNL GLEKIANTVR
      121 FPCKFASSGC PLFFYHFDKV EHEEGCECRP YSCPCPGAAC KWQGALNDVM DHLKKVHKSI
      181 TTLQGEDIVF LATDINLPGA VDWVMMQSCF GYNFMLVLEK QEKFDHGQQV FYAVVQLIGA
      241 KKEADNFMYR LELSTHRRRL CWEATPRSIH EGVAHAIQLS DCLAFDTPTA QLFAENGNLG
      301 INVTISMV
//