LOCUS       WKY05465.1              1126 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2292
PROTEIN_ID  WKY05465.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006019"
                     /note="NIPPO_CHRIV.G9859.T2"
     intron_pos      11:2 (1/17)
     intron_pos      54:0 (2/17)
     intron_pos      89:0 (3/17)
     intron_pos      118:0 (4/17)
     intron_pos      180:2 (5/17)
     intron_pos      222:0 (6/17)
     intron_pos      297:2 (7/17)
     intron_pos      769:0 (8/17)
     intron_pos      842:1 (9/17)
     intron_pos      876:0 (10/17)
     intron_pos      904:0 (11/17)
     intron_pos      932:2 (12/17)
     intron_pos      960:0 (13/17)
     intron_pos      981:2 (14/17)
     intron_pos      1019:2 (15/17)
     intron_pos      1054:1 (16/17)
     intron_pos      1078:2 (17/17)
BEGIN
        1 MGAALAGEMS KSKSFLRSSS GTSYPYPRTH TTLMVVPSPR PVGPEETSVT RKQAPRRRPP
       61 LNRSIPPIPE SKSNESIMSH ASRRSSDKVE QSPDCVVIEN RSALEQLQRL QKTSGTSIPR
      121 PPSTKKTASQ KKEPKTARSE TPRSPLMTVA RTVKSKFSKL TRMGRHDQDV SMKGSQSFSG
      181 IRQPKAALPK RVDQNANRVI KSSSMEVPPT SQEQPSTSRH MVVIPQNPKR LEDFSEEASL
      241 AEQGKTEEAA AVDDTTETRL LLTNIPLQHH NDHQALSVTL DEDVLVVTKP LEPSDQSEKT
      301 PTVSPTQPKP STERVTFTEQ QVIHISAVEA KSSPMSSELE HAKSVDSNPK PPEEQVNTTK
      361 TPVGSRKHHT FTLGEKIPDT SSELKAVVPS VEPQNVGSVE RELSPPPRYL MSVKTPESAR
      421 KHRTFVVTHS DPKAKPAVEN SAVAKKTKRV KIIKQRSMPE STASPECYIL KVKTPEALRR
      481 HHTFTIRERP RSPDVPYIEE GEVTEPIATI GPTAEKLRMQ KKIEDVGKTK EDEKPPPEKF
      541 TMSVKTPLTM KKFKTFIVEE KKKEEVVRTS MSVDALGPSK VGPQEEEVKA VLSVSTKENT
      601 VKGERKEIEK SEKLPSAVTA TPSAMRKSQT AIIDQKNEED PQGNPDGISS LSRLEELSEV
      661 GPPLKTSEMY VLTTMTPLPQ RKASADSCLE RIAREKTRSS SRSPEKLSLF IMGGRFPRSH
      721 PPSVEGKRPT KYAVVQPRQG EADFATSKKD HSQSDRAEFV ERRNSVSSGE MTSPEEEIPM
      781 DTHLTPTEET HDDTLIIRPI RRPPEVTSPI AEEPEVSVAE SPFIEEKAVR MDVQLESSTS
      841 SDPPVFRPPS PPRESFKPVT TSKSTSPLRR RGSTEEACVA TREEKKRVRL SFRSKSEDRK
      901 EKKMEERERL KKEKREEKER TPRSPKMPIA ARSLRSAGKM LTPAFFRKAA DSKIPKPTKA
      961 SHAPSPMPAT KPRMQLPFRN GQKAPLAEFE SSVVEDSPAV ENNPITFEKW NNSPRGRRRH
     1021 SAHINGFTEP IVEESDGNGN AICSASTTAP LSSRVECVMS PTIARHEPAP GLIDDEILDQ
     1081 PMLVGDTFSH SESNDCLSAV RRMEFEAEKA TLISIDRSLA EDSDTM
//