LOCUS       WKY05315.1               495 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2140
PROTEIN_ID  WKY05315.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005935"
                     /note="NIPPO_CHRIV.G9775.T2"
     intron_pos      6:2 (1/15)
     intron_pos      31:2 (2/15)
     intron_pos      50:0 (3/15)
     intron_pos      92:0 (4/15)
     intron_pos      121:0 (5/15)
     intron_pos      164:1 (6/15)
     intron_pos      202:0 (7/15)
     intron_pos      230:2 (8/15)
     intron_pos      263:0 (9/15)
     intron_pos      293:0 (10/15)
     intron_pos      328:0 (11/15)
     intron_pos      368:0 (12/15)
     intron_pos      400:1 (13/15)
     intron_pos      453:0 (14/15)
     intron_pos      478:1 (15/15)
BEGIN
        1 MATRKRGSVR RRHYPLFCSS RISCRLAAAV RTTSNAAVGR KSLTMNRIGP LRRWRSSVER
       61 VRNVFFPETV VSTLPNGFRV ATEDIKIPTA TIGVWIDAGS RYENDRNNGT AHFLEHMAFK
      121 GTSRRSRSGL ELEVENIGAH LNAYTSREQT VYYAKCFSKD LEQSVDILSD ILLNSNLNSR
      181 DIEAERSVIL REMQEVEQNL QEVVFDHLHT GAFEGNPLSM TILGPVENIN SIQRSDLTDY
      241 IQTHYRSGRM VLSAAGGVCH DEVVKLAEKY FGGLKHGDAS ANFHPAQFKP CQIHLPVDGM
      301 DFVYGAMVVE GVSWTHEDNL ALMVANTLIG EWDRSRGFGV NAPSRLALRL GRNAGVQSFQ
      361 AFNTCYKDTG LIGVYFVAEE GASEALVDAV VDEWRWLANE VNEEQVECGK RTLLTNLLLM
      421 LDGSTPICED IGRQLLCYGR RIPVPELELR IQAINVDTVR EACRKTFMKS SVATTVVGRT
      481 ERFPSNAVIE DKLHR
//