LOCUS WKY05274.1 1174 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-2099
PROTEIN_ID WKY05274.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005913"
/note="NIPPO_CHRIV.G9753.T3"
intron_pos 28:2 (1/29)
intron_pos 54:0 (2/29)
intron_pos 103:0 (3/29)
intron_pos 125:0 (4/29)
intron_pos 165:0 (5/29)
intron_pos 210:0 (6/29)
intron_pos 260:0 (7/29)
intron_pos 302:0 (8/29)
intron_pos 340:2 (9/29)
intron_pos 375:0 (10/29)
intron_pos 430:0 (11/29)
intron_pos 481:1 (12/29)
intron_pos 534:0 (13/29)
intron_pos 578:1 (14/29)
intron_pos 623:1 (15/29)
intron_pos 642:2 (16/29)
intron_pos 701:0 (17/29)
intron_pos 732:0 (18/29)
intron_pos 756:0 (19/29)
intron_pos 788:2 (20/29)
intron_pos 829:0 (21/29)
intron_pos 880:0 (22/29)
intron_pos 915:0 (23/29)
intron_pos 963:0 (24/29)
intron_pos 1018:0 (25/29)
intron_pos 1047:1 (26/29)
intron_pos 1081:1 (27/29)
intron_pos 1134:2 (28/29)
intron_pos 1156:0 (29/29)
BEGIN
1 MEMDASVISS MTSSRIADVP STVQVALRIR PQGNREKLEG SRVCTSVVPG EPQVTIGTDR
61 SFTYDHVFDQ ATQQHEIYQS CIQNLVHGLF DGFNATVLAY GQTGSGKTYT MGTAFDASAV
121 AEHEVGVVPR ALSHVFHRVA ELKREAREAN ILEPNFEVSV QFIELYNEEI IDLLANDRCS
181 SLNVRIHEDA RGEIYLHGAT SKQVQDLHST LEILRNGALN RTVAATNMNE QSSRSHAIFS
241 LLLKQQRVVP QSGDAPSTQE IEMEVLTAKF HFVDLAGSER LKRTGATGDR AKEGISINCG
301 LLALGNVISA LGGANGKVSH VPYRDSKLTR LLQDSLGGNS RTLMVACVSP SDSDFVETLN
361 TLKYANRAKN IKNKVVANQD KSSKLIGELR GRIASLEAEL LEFKQGRRTV NSDGVETVND
421 QYHENVMLTA EINQLRFRVK ALQETNEILR NRNVDLMAKG LCPNGDTANS PTYDNEGSSD
481 EANSSLSNDV VLDPVQATVR KYLEELERVR SQLYESQAVS NQLRKEMIKW KNQALGNTGF
541 AEGSHAPYSP SNHQQLIEDA RADIERLRRT VSVASNEVTS DYASHADTAE DDGTSNDADE
601 LDEDDDYDQE MDDEAVFDDD NKGAMLRDNL ADLQTEINIK ERLIAELEKS DRHLAEVRLT
661 YEKKLTELSA QIKKMEAERD RVVMEAEARK TDKGSQEQAK RIREEYERKL ADMRNEFRKL
721 QMVEREHKRM QARQERERQE LMRYQAELKE LKRVKVDLMK KIKEEMKKAQ QQQSNASKKL
781 AALDKEARRR DNIIRQLENK DRQREQFMKR TTEEINRLRK AQQEQMNKAR TGGTSRMATN
841 LRAASLQRVR TPGSRGQPPP EATYSPRQAK MKWSFIEKKI SRLVTQKQTV GKMEEELERL
901 IEERARLTEE VKSLESRFVL VNDVTEREAV AEQIDGCQQK IRYVLDQITE TQTAITDMDA
961 AKDVDADNND GSMELNNIEG LIEHCSNLIE AKYLMQHLFN ACLEHAVAAA KADSHNKESE
1021 ARIQQLEQQS FINEQLLSTV ISDKSLINDV EGMLEQSAQK KSRSPSLASL RNSSASPSRM
1081 ESAEPLPYRA RRHTATTDEL LYPTESTEAV SVKEEAPKPD LLPDEEKKEK KQRVDASPLL
1141 LPSSSSSSTL MNGQQTVASG PSPLESNDSE LSRV
//